Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03091 ATGGCACAAACAGTCTCTAAGGAAATGCTCCTTTTCAAATTGTCACTCGCTTGTTCTTCACAGAATGTCGAAAATAGGACAAGTGACAATGAAGGTTCTGACACTGATGATGGTATTGTGTTTGATATTGATCCTAGTTTGCTTGTGGATTGTGATAAAATACTCATTGGTGACATGATCGGAAAAGGCTCGCACTCTCTTGTATACAAAGGATGGTATGAAGATCGTCCTATAGCCATTAAGGTTATACACCCAAAATGTAAAGCCAAATTTGAGAGGGAAGTTAAGCTTTTATCTAAGATTCAACACACAAATGTTGTCGAGTTTATTGGAGCTTGTGTGAAACCATTAATGGTGATAATCATAGAACTATTAGAAGGTGGTTCACTTCAGAAAGCCATGAATAACATCTATCCAACAACATTTTCATTGGAACAATGTTTGAGTTATGCTATTGATATATCACAAGCTATGGAGTATTTGCATTCAAATGGCATCATTCACCGTGATCTCAAGCCTGGTAATTTATTGCTTACAAGAGACAAGTATAATATTAAACTTGCTGATTTTGGGATAGCTAGAGATAATATATGTGATGAGATGACTTGTGAAGCTGGTACCTATAGATATATGGCTCCTGAGATTTTAAGCAAAGATCCACTTCCAAAAGGAGCAAAGAAAAGCTATGATCACAAAGCTGATGTGTACAGTTTTGCAATGGTTTTTTGGTCTATGATGAAAAATCAAGTTCCATTTAAAGATAGGGCTGACTTAATGGCTGCATATGATGCATTAAACAATTTAAGACCATGTTTGGATGAATTTCCTGAAGATATAAGTCTCTTGCTTCAATCTTGTTGGATGGAAGATCCAAAACTTAGGCCAGAATTCACAGAAATAACTGAAACACTGATAAGAATTCTTCATAATGTATACAGAAGAAAGATTAATGGACTTGCCAGCAGCATAGAAGTTGTTGAAGAAGTTGATAGCGAAAGTGAGGAAGAAATATCAAGGGCACAAGATACTCCAACTAGCTTTGAATCAACTATGGAGATTGAAAACATAGCCATGCATGAGAATGAGACTATGAAACCTAATGGAGAAAGTGATGGTGAATCTCAGAGTGGAACCAAGACATCACTCTCTGACTTGATGGAAAAGAAGTCCAAAAAGAAGAGTAAGATTAAGCGCTTTTTTTCTTGCTGTAAGTGCATTGCCTTCTGA 1227 0.3627 MAQTVSKEMLLFKLSLACSSQNVENRTSDNEGSDTDDGIVFDIDPSLLVDCDKILIGDMIGKGSHSLVYKGWYEDRPIAIKVIHPKCKAKFEREVKLLSKIQHTNVVEFIGACVKPLMVIIIELLEGGSLQKAMNNIYPTTFSLEQCLSYAIDISQAMEYLHSNGIIHRDLKPGNLLLTRDKYNIKLADFGIARDNICDEMTCEAGTYRYMAPEILSKDPLPKGAKKSYDHKADVYSFAMVFWSMMKNQVPFKDRADLMAAYDALNNLRPCLDEFPEDISLLLQSCWMEDPKLRPEFTEITETLIRILHNVYRRKINGLASSIEVVEEVDSESEEEISRAQDTPTSFESTMEIENIAMHENETMKPNGESDGESQSGTKTSLSDLMEKKSKKKSKIKRFFSCCKCIAF 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03091 408 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 306 - -
Vivi2g03091 408 ProSiteProfiles Protein kinase domain profile. 54 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03091 408 MobiDBLite consensus disorder prediction 368 383 - -
Vivi2g03091 408 Gene3D Transferase(Phosphotransferase) domain 1 127 352 - -
Vivi2g03091 408 MobiDBLite consensus disorder prediction 361 395 - -
Vivi2g03091 408 Gene3D Phosphorylase Kinase; domain 1 42 126 - -
Vivi2g03091 408 ProSitePatterns Protein kinases ATP-binding region signature. 60 81 IPR017441 GO:0005524
Vivi2g03091 408 Pfam Protein tyrosine and serine/threonine kinase 56 304 IPR001245 GO:0004672|GO:0006468
Vivi2g03091 408 PRINTS Tyrosine kinase catalytic domain signature 233 255 IPR001245 GO:0004672|GO:0006468
Vivi2g03091 408 PRINTS Tyrosine kinase catalytic domain signature 160 178 IPR001245 GO:0004672|GO:0006468
Vivi2g03091 408 PRINTS Tyrosine kinase catalytic domain signature 122 135 IPR001245 GO:0004672|GO:0006468
Vivi2g03091 408 PRINTS Tyrosine kinase catalytic domain signature 275 297 IPR001245 GO:0004672|GO:0006468
Vivi2g03091 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Vivi2g03091 408 SUPERFAMILY Protein kinase-like (PK-like) 44 305 IPR011009 -
Vivi2g03091 408 CDD STKc_MAP3K-like 60 304 - -
Vivi2g03091 408 SMART serkin_6 54 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03091 Vivi-Chr2 130869510 130872078 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03091 36 311 MAP Kinase Kinase Kinase AT5G66710 49.825 3.34e-100 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vivi2g03091 PK_Tyr_Ser-Thr 7.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03091 - K04427 gsj:114390113 379.022