Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03063 ATGTCTGACTCAAACATAGCTTTCTACTGTCTTTCTTCCATTCTTTCTCTTCTCCTCATCTTCATTATCTTCAAAAGAAAACCAACCAAACCCAAACTCAATCTTCCTCCCGGAAAAATGGGTTGGCCTTTTCTTGGTGAAACCATTGGTTACTTGAAACCTTATTCTGCTACCACAATAGGTGAATTCATGGAACAACACATAGCAAGGTATGGTAAAATTTATAAGTCAAAATTGTTTGGTGAACCAGCAATAGTTTCAGCAGATGCAGGGTTGAATAGGTTCATATTACAGAATGAAGGAAAGTTATTTGAGTGTAGCTATCCTAGAAGCATTGGTGGAATACTTGGGAAATGGTCTATGTTGGTTTTGGTTGGTGACATGCATAGAGACATGCGTGTTATATCTCTCAATTTTTTGAGTCATGCTAGACTTAGAACACATCTTTTGAAGGAAGTTGAGAAACATACTCTTCTTGTTTTGAGTACTTGGAAGGAAAAATCCACATTTGCAGCTCAAGATGAAGCCAAAAAGTTCACATTTAATTTGATGGCAGAGCACATTATGAGTTTGCAACCTGGAAAAATAGAGACAGAGAAGTTAAAGAAAGAGTATGTTACTTTTATGAAAGGTGTTGTATCAGCACCATTGAATTTTCCAGGAACTGCATACTGGAAAGCATTAAAGTCTAGGTGCAAAATATTGAAGTTCATAGAGGAAAAAATGGAAGAAAGGATTCAAAGAATGAAAGATGGAAATGAAAATTTGGAGGAACATGATCTTTTGAATTGGGTTTTGAAACACTCAAATCTTTCAACAGAGCAAATTCTTGACTTGATTCTGAGTTTGCTTTTTGCTGGTCATGAAACTTCTTCTGTTTCTATAGCTCTAGCTATTTACTTTCTTCCCGGTTGTCCTCGAGCTATACAACAATTAAGGGAAGAACACAGAGAAATTGCTAGAACCAAAAAGCAAGCAGGGGAAACAGAACTGACTTGGGAAGACTACAAAAAAATGGAATTTACTCATTGTGTTGTGAATGAAACACTTAGGCTAGGTAATGTTGTGAGGTTCCTTCATAGGAAAGCTCTTAAAGATGTTCGGTACAAAGGTTATGATATTCCTTGTGGGTGGAAAGTGCTTCCGGTTATTGCAGCCGTGCATTTGGATCCATTACTTTTTGACCAACCTCAACATTTTAATCCATGGAGATGGCAGAACAATGGAAATGGCTCAAACACAAGTAATAATAATAACAATTTCTTACCGTTTGGAGGAGGACCACGACTATGTGCAGGATCAGAATTAGCTAAGCTTGAAATGGCTGTTTTCATCCACTATCTCATCCTCAACTACCATTGGGAGTTAATTGATAATAATGATCAAGCTTTTGCCTACCCTTTTGTCGATTTTCCTAAAGGCCTAAAAATTCAAGTTCAACCCCATCAATTATAA 1455 0.3691 MSDSNIAFYCLSSILSLLLIFIIFKRKPTKPKLNLPPGKMGWPFLGETIGYLKPYSATTIGEFMEQHIARYGKIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVEKHTLLVLSTWKEKSTFAAQDEAKKFTFNLMAEHIMSLQPGKIETEKLKKEYVTFMKGVVSAPLNFPGTAYWKALKSRCKILKFIEEKMEERIQRMKDGNENLEEHDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVSIALAIYFLPGCPRAIQQLREEHREIARTKKQAGETELTWEDYKKMEFTHCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPCGWKVLPVIAAVHLDPLLFDQPQHFNPWRWQNNGNGSNTSNNNNNFLPFGGGPRLCAGSELAKLEMAVFIHYLILNYHWELIDNNDQAFAYPFVDFPKGLKIQVQPHQL 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03063 484 CDD CYP90-like 67 481 - -
Vivi2g03063 484 PANTHER CYTOCHROME P450 26 31 459 - -
Vivi2g03063 484 FunFam Cytochrome P450 90B1 25 481 - -
Vivi2g03063 484 SUPERFAMILY Cytochrome P450 32 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03063 484 Pfam Cytochrome P450 36 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03063 484 Coils Coil 239 259 - -
Vivi2g03063 484 Gene3D Cytochrome P450 25 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03063 484 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03063 484 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03063 484 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03063 484 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03063 484 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03063 484 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03063 484 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Vivi2g03063 484 Coils Coil 309 329 - -
Vivi2g03063 484 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03063 484 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03063 484 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03063 484 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03063 Vivi-Chr2 130503648 130508805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03063 25 406 Cytochrome P450 AT3G50660 74.194 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03063 K09587 - gmx:100789515 824.313