Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03011 ATGGAGAAGACACGACTAGATGAATTATTTCCTCTGACTCCAAGTTCAATATTCTCGACCAAGAAGGGACGCAGTGGATACGAACCATCAGACACAGAGACGGAGTGGCAAGACACTCCACGTCACGAACGAGGTAGAAAGAACATGACCTTAGTCTCGTCGTCACCTTCGATAGCAGGTTCGGTTCTTAACCAACCAAGAAGACGATATCTCAGCAAATCACCCTATAAGCTACGCATAGCACGCGAGGAGGGTAATGATGATGAAGACGCTTCGTTATCATACATGTCTGGTTTGAACTCAAGTAGAAATATTAGTCCTTTGCCAAGACCCGACTTTGGAAGAACTGTGTCTCCTTATAGCAGAAATCATCTGCAAAAAACACCTTCTAATGAAAACAGAAAAGCGAATTCAGGACTTCTGGAAGTGGATAGAGCGAGTACGAAACCAAACTACAGGAGAGCAGTAACTGCTCCAAGATTGAGAGACCAACAGCAAACACTGCAAAACACAGCGAGAATTCTGAAACAAAGGGAAAAATCTCCCTTCAAAACAGGTTCAATTAGAGAAAGAGAAGTCAATGAAACGAAAGCACAAGTGAAGCTATCGAAAAATAATCCTACGGATGATTATTCATCAGCACTGGAAAGTACAGACTCAATTCAACCTGGTGACCTTTTCTTTTCCCGCGAATGCAATGCCTTGCAAGCGAAGAATCCTTCATTGCCTAAAAAAGTTGAACAATACGGTTATTTTAGTCCAAGACCGGTGATCACCACCATTAACAACGCACCTGAAAGTGGTAAATTCAATACGAATATGAATAAGCCGAGAACCTCTTCCAGTAATACGTTGCTGTCTCGAACAACGATGGGACCATCAATCAGAAAGGGAAGTGGAAGTGGAAACTCGAGCACTAAATCTAGCGTAAAAAGTGACGCTAGCACAAAGACAACCGAAAGCATGAGGAAATTCACATCCAACAGAAAAAAGAACCAGAAAGATGCATGGTTTTCCTGCATGATGAGAACAGGGAACTGTAGAACTTCAAGAAAATCACCTGAACGTAGACCAATCGACGAAGCTTCCTTGATCGAGAGGACAACAATTGTGGAAAGCATTCCACAACTTTGGGCCGATAAACATCAACCAGCTTCACTCAATGGCTTCATTTGCAACAAACAAGAAGCTCAACTTCTCAAGGAACTAGTAGTGTCACGGAGCTCTTGTCCTCACATTTTGCTCAAAGGACCCTCTGGCTCCGGGAAAAGAGATCTAGCAATGGCTTTTCTTAGAGAAGCATACGGCGATTCATGTTGTAAACTGTCACATGATCTAAGACATTTCCCTATTCAGGACAAAAGGACTGTGAAAGTATCGGTTCCAATCACGTCAAGTCCTCATCACATGGAGCTCAATGCAAATTCAGAACCAAATGCTAAATATGCTTTGATGGGACTAATCAAAGAAATCAGCAATATATATGCAATTGCCCCTGAAGTAAGCAATGTGAATTTCAAGTCAGATTATAAAGTAATAATTCTTTACGAGGTCGACAAAGCGGTAGAGAACATTCAACACTTGATCAAATGGATCATAGACCGTTATTCAGATATATGCAAATTAGTTCTATGCTGTGAAGATGATGAAAATATTATTGCACCCGTGAAAAACCGGTTCAAAGTTATCAATGTTGATGCACCTCAAACTCATGAAATTATTGAGGCTCTTACGCAGATAGCGAATAAAGAGGAAATTGATCTATCCATGAGTTTTGCCATGAAGATTGCTACAAAATCTAAGCAGAACCTCAGGGAAGCAATACTGGCCCTTGAAGCCTGCAAAGCACATAACTATCCATTTTCAGAAGAGCAACCAATTCCAGTTGGATGGGAGAAGATTGTAATAGAACTTGCTGTAGAGATCCTAACTGATCCATCATTTTCGCGCTTGCTCTCAATAAGAGGGAAATTTCAAATGCTTCTCCTGGATTTTGTCCACCCGAAATTGATTCTCCTGAAACTTGTGGAAGAGCTCTTAAGAAGAGTTGAGACCGGCTTAAAACGGGAGCTCTACTACTGGCATGCTTATTATGTGAGTAACGAGTAA 2109 0.4135 MEKTRLDELFPLTPSSIFSTKKGRSGYEPSDTETEWQDTPRHERGRKNMTLVSSSPSIAGSVLNQPRRRYLSKSPYKLRIAREEGNDDEDASLSYMSGLNSSRNISPLPRPDFGRTVSPYSRNHLQKTPSNENRKANSGLLEVDRASTKPNYRRAVTAPRLRDQQQTLQNTARILKQREKSPFKTGSIREREVNETKAQVKLSKNNPTDDYSSALESTDSIQPGDLFFSRECNALQAKNPSLPKKVEQYGYFSPRPVITTINNAPESGKFNTNMNKPRTSSSNTLLSRTTMGPSIRKGSGSGNSSTKSSVKSDASTKTTESMRKFTSNRKKNQKDAWFSCMMRTGNCRTSRKSPERRPIDEASLIERTTIVESIPQLWADKHQPASLNGFICNKQEAQLLKELVVSRSSCPHILLKGPSGSGKRDLAMAFLREAYGDSCCKLSHDLRHFPIQDKRTVKVSVPITSSPHHMELNANSEPNAKYALMGLIKEISNIYAIAPEVSNVNFKSDYKVIILYEVDKAVENIQHLIKWIIDRYSDICKLVLCCEDDENIIAPVKNRFKVINVDAPQTHEIIEALTQIANKEEIDLSMSFAMKIATKSKQNLREAILALEACKAHNYPFSEEQPIPVGWEKIVIELAVEILTDPSFSRLLSIRGKFQMLLLDFVHPKLILLKLVEELLRRVETGLKRELYYWHAYYVSNE 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03011 702 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 378 698 - -
Vivi2g03011 702 Gene3D - 376 568 IPR027417 -
Vivi2g03011 702 SUPERFAMILY post-AAA+ oligomerization domain-like 630 698 IPR008921 GO:0003677|GO:0006260
Vivi2g03011 702 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 369 614 IPR027417 -
Vivi2g03011 702 MobiDBLite consensus disorder prediction 26 48 - -
Vivi2g03011 702 MobiDBLite consensus disorder prediction 263 322 - -
Vivi2g03011 702 Gene3D - 570 627 - -
Vivi2g03011 702 MobiDBLite consensus disorder prediction 102 150 - -
Vivi2g03011 702 MobiDBLite consensus disorder prediction 195 215 - -
Vivi2g03011 702 MobiDBLite consensus disorder prediction 263 330 - -
Vivi2g03011 702 MobiDBLite consensus disorder prediction 119 137 - -
Vivi2g03011 702 Gene3D - 630 701 - -
Vivi2g03011 702 MobiDBLite consensus disorder prediction 1 48 - -
Vivi2g03011 702 FunFam Replication factor C subunit 3 376 568 - -
Vivi2g03011 702 FunFam replication factor C subunit 3 569 627 - -
Vivi2g03011 702 MobiDBLite consensus disorder prediction 199 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03011 Vivi-Chr2 129110970 129114080 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03011 377 698 Core DNA Replication Machinery Family AT5G27740 37.846 3.47e-68 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03011 K10756 - gmx:100795321 873.233