Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02991 ATGACTAATCGTTTTTATCCCTCTTTTGCAAACATTGGTTCAGCATCGTCATGGTTCGAAATATACGCTGCTTTTTCCACGTTCATGATGATTTTCAGAACTGCAATCAACGATCTCATACCCTTAAAACTTCGAAACTTCATCCTCTCAAAGCTACAAGAATTCTTCTCAGGTTATCGACCCAGTAACGAAGTCTCACTTCAAATCGATCAGATTTGGGATGGAAATACCAACAATCTCTTCTATGCAGCCAAAGAGTATCTCCCTACTAAAATATCCAACACTTACAAATCTCTCAAAGTTGGAAAAATATCTGATCATGACAACCTTCTCTTAGCTTTTGACGGAAAGCAACAAGTGTTGGATGAATTTGAAGGCATCAAGATTAAATGGATGCTTATTCAAAAACCCTATAACGATAACCACGGTTTTCAAAGTCCCAATCCCGTTAGAAAAATAGGAGATCTAGGTTATGGTTATCCCAAAGCATCTCGCAAGGCAAAAGAATCTACTGAGAATGGATTTGTGTTAAGTTTCGATGAGAAACATAGAGATAAAATAATGGAGAAATATATTCCACATGTTTTAAGCACTTATGAAGCTATAAAAGCAGGAAATAGAACTCTCAAGATCCATTCCATGCAAGATGGGCATTGGCAACACAGTGATTTTAACCATCCTGCTTCATTTGATTCACTTGCTTTGGATCCTGATCTAAAGAAATCTATAATTGATGATATTGATAGGTTTTTGGGTAGGAAAAAGTTTTACAAAAAAGTGGGCAAGCCATGGAAACGTGGTTACCTATTGTATGGGCCACCAGGGACAGGAAAATCTAGTCTTATTGCTGCTATAGCAAAGTACTTGAAATTTGATGTATACGATTTGGATCTTAGTTTGGTGTATTGTAACTCACAACTCACTACATTAATGAGAGGAACATCTAACAGATCCATCATTGTTGTTGAAGACATTGACTGCAACAAAGAGGTGCTTAATCGATCAAAGGCTCAGGCATATGAGGGGGCATATCCGGGTTTTGGACAAGCTGATACAAAAACGTTTACTATGTCGGGTCTTCTTAATTGTATGGATGGTTTGTGGTCAAGTTTTGGAGATGAACGCATTTTCATATTTACTACAAATCATAAAGACAAAGTTGATTCAGCATTGTTGCGTCCTGGTCGAATGGATAAGCATATTCACCTCTCCTTCCTCGAAACCAAGGCATTCAAAATCTTAGCTTCTAACTATTTGGACATTGAAGAACAACATCAGTCTCTCATTCAACAAGTTGAAGAGCTATTGGAAAAAGTAGATGTCACCCCTGCTGTAGTGGCTGAACATTTGTTGAGAAATGAGGATGCTAAGGATGCTCTAGAAGGACTTGTTGAATTTCTTCATGAAATTTCAATAGAGGAGAATGAAGAATAA 1434 0.3738 MTNRFYPSFANIGSASSWFEIYAAFSTFMMIFRTAINDLIPLKLRNFILSKLQEFFSGYRPSNEVSLQIDQIWDGNTNNLFYAAKEYLPTKISNTYKSLKVGKISDHDNLLLAFDGKQQVLDEFEGIKIKWMLIQKPYNDNHGFQSPNPVRKIGDLGYGYPKASRKAKESTENGFVLSFDEKHRDKIMEKYIPHVLSTYEAIKAGNRTLKIHSMQDGHWQHSDFNHPASFDSLALDPDLKKSIIDDIDRFLGRKKFYKKVGKPWKRGYLLYGPPGTGKSSLIAAIAKYLKFDVYDLDLSLVYCNSQLTTLMRGTSNRSIIVVEDIDCNKEVLNRSKAQAYEGAYPGFGQADTKTFTMSGLLNCMDGLWSSFGDERIFIFTTNHKDKVDSALLRPGRMDKHIHLSFLETKAFKILASNYLDIEEQHQSLIQQVEELLEKVDVTPAVVAEHLLRNEDAKDALEGLVEFLHEISIEENEE 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02991 477 SMART AAA_5 264 407 IPR003593 GO:0016887
Vivi2g02991 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 455 IPR027417 -
Vivi2g02991 477 Pfam Domain associated at C-terminal with AAA 40 134 IPR025753 -
Vivi2g02991 477 Gene3D - 402 469 - -
Vivi2g02991 477 Pfam ATPase family associated with various cellular activities (AAA) 269 403 IPR003959 GO:0005524|GO:0016887
Vivi2g02991 477 PANTHER BCS1 AAA-TYPE ATPASE 23 471 - -
Vivi2g02991 477 Coils Coil 418 438 - -
Vivi2g02991 477 Gene3D - 220 401 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02991 Vivi-Chr2 128801579 128803133 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02991 266 403 Calmodulin-binding Proteins AT3G56690 29.452 8.05e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02991 - K08900 gmx:100787726 543.888