Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02976 ATGCAGGAAATCATATATTTCTCAGAATTGCACTTAATACAGGAGTCAGCAAGCTTGTTTTTCCTGTTTATAGAAACATCACTGCTTTCATTCTTCTTGCTCCACTCGCATATTTCACTGAAAGATAGGCCACCAATAAACAGTTATTGTTTGTTGCAGTTTTTCCTACTTGGACTTGTTGGAATAACTATGAAAGAAGGATTTTACCTTGTGGGTTTGGACAATACATCGCCGACATTTGCTTCTGCTATGCAAAATTCTGTTCCTGCCCTTACATTTCTTATGGCTGTGATACTAAGATATGAGAGCTTGCGCTTAAATAGGCTTAATGGTATAGCTAAGGTTCTTGGAGTACTTGCTTCTGTTGGAGGAGCTTCAATCATTACCCTTTACAAAGGACCAACAATTTATGCTCCGGAATCACCTTTAGCAGTGCATCAGGGACAATTCTTGTCGCTATTTGAGGATTTCAATGGGAAAAACATGAGCTTGGGTGGCATTTTTCTCTTTGGTCACTGTTTGAGTTGGTCTGGTTGGATTGTGATGCAAGCATTTGTTCTGAAAAATTATTCAGCACAACTTACTGTTTCTGCTTTTACTTGCTTATTTGGTATTGTGCAGTTTGGGACAATTGCGGCATTTTTTGAGAAGGATCCCAAAGCTTGGCAGCTCAATTCCATTGATGAGGCCTATAGTATTTTGTACTCGGGAGTGGTGATTTCAGGGGTGGCAGCAGCAATACAAATATGGACTATTAGCAAAGGAGGGCCAGTGCTTGCTTCAATTTATCTTCCCTTACAGACATTGCTTGTAGCTTTGATAGCATCCATTGTTTTTGATGAAGAGTTCTTCTTGGGAGGGATAATTGGAGCGATCTTAATTATAACCGGTTTATACCTTGTTGTATGGGGAAGAAGTCAAGAAACCAAGTCTGATGAGCCTGAGAATCGCGTGGATCGCGTGGAAGAAAAAATTGACAGTTCTTCCCTCATCCAACCATTGATTTCTGTGCACAACTCGTAG 1023 0.4027 MQEIIYFSELHLIQESASLFFLFIETSLLSFFLLHSHISLKDRPPINSYCLLQFFLLGLVGITMKEGFYLVGLDNTSPTFASAMQNSVPALTFLMAVILRYESLRLNRLNGIAKVLGVLASVGGASIITLYKGPTIYAPESPLAVHQGQFLSLFEDFNGKNMSLGGIFLFGHCLSWSGWIVMQAFVLKNYSAQLTVSAFTCLFGIVQFGTIAAFFEKDPKAWQLNSIDEAYSILYSGVVISGVAAAIQIWTISKGGPVLASIYLPLQTLLVALIASIVFDEEFFLGGIIGAILIITGLYLVVWGRSQETKSDEPENRVDRVEEKIDSSSLIQPLISVHNS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02976 340 Pfam EamA-like transporter family 165 302 IPR000620 GO:0016020
Vivi2g02976 340 Pfam EamA-like transporter family 19 115 IPR000620 GO:0016020
Vivi2g02976 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 117 - -
Vivi2g02976 340 PANTHER WAT1-RELATED PROTEIN 24 313 IPR030184 GO:0016020|GO:0022857
Vivi2g02976 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02976 Vivi-Chr2 128385625 128387903 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02976 41 335 Nodulin-like Gene Family AT1G75500 53.871 3.69e-113 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02976 - - ccaj:109801260 417.927