Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02975 ATGGTGTCTGAACGAGCTAAGCTTCACACAGCCTTGACTTTTTTACAATTCTGTCATGCAGGAAATCATATATTTCTCAGAATTGCACTTAATACAGGAGTCAGCAAGCTTGTTTTTCCTGTTTATAGAAACATCACTGCTTTCATTCTTCTTGCTCCACTCGCATATTTCACTGAAAGGAAAGATAGGCCACCAATAAACAGTTATTGTTTGTTGCAGTTTTTCCTACTTGGACTTGTTGGAATAACTATGAAAGAAGGATTTTACCTTGTGGGTTTGGACAATACATCGCCGACATTTGCTTCTGCTATGCAAAATTCTGTTCCTGCCCTTACATTTCTTATGGCTGTGATACTAAGATATGAGAGCTTGCGCTTAAATAGGCTTAATGGTATAGCTAAGGTTCTTGGAGTACTTGCTTCTGTTGGAGGAGCTTCAATCATTACCCTTTACAAAGGACCAACAATTTATGCTCCGGAATCACCTTTAGCAGTGCATCAGGGACAATTCTTGTCGCTATTTGAGGATTTCAATGGGAAAAACATGAGCTTGGGTGGCATTTTTCTCTTTGGTCACTGTTTGAGTTGGTCTGGTTGGATTGTGATGCAAGCATTTGTTCTGAAAAATTATTCAGCACAACTTACTGTTTCTGCTTTTACTTGCTTATTTGGTATTGTGCAGTTTGGGACAATTGCGGCATTTTTTGAGAAGGATCCCAAAGCTTGGCAGCTCAATTCCATTGATGAGGCCTATAGTATTTTGTACTCGGGAGTGGTGATTTCAGGGGTGGCAGCAGCAATACAAATATGGACTATTAGCAAAGGAGGGCCAGTGCTTGCTTCAATTTATCTTCCCTTACAGACATTGCTTGTAGCTTTGATAGCATCCATTGTTTTTGATGAAGAGTTCTTCTTGGGAGGGATAATTGGAGCGATCTTAATTATAACCGGTTTATACCTTGTTGTATGGGGAAGAAGTCAAGAAACCAAGTCTGATGAGCCTGAGAATCGCGTGGATCGCGTGGAAGAAAAAATTGACAGTTCTTCCCTCATCCAACCATTGATTTCTGTGCACAACTCGTAG 1083 0.4035 MVSERAKLHTALTFLQFCHAGNHIFLRIALNTGVSKLVFPVYRNITAFILLAPLAYFTERKDRPPINSYCLLQFFLLGLVGITMKEGFYLVGLDNTSPTFASAMQNSVPALTFLMAVILRYESLRLNRLNGIAKVLGVLASVGGASIITLYKGPTIYAPESPLAVHQGQFLSLFEDFNGKNMSLGGIFLFGHCLSWSGWIVMQAFVLKNYSAQLTVSAFTCLFGIVQFGTIAAFFEKDPKAWQLNSIDEAYSILYSGVVISGVAAAIQIWTISKGGPVLASIYLPLQTLLVALIASIVFDEEFFLGGIIGAILIITGLYLVVWGRSQETKSDEPENRVDRVEEKIDSSSLIQPLISVHNS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02975 360 Pfam EamA-like transporter family 17 135 IPR000620 GO:0016020
Vivi2g02975 360 Pfam EamA-like transporter family 185 322 IPR000620 GO:0016020
Vivi2g02975 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 137 - -
Vivi2g02975 360 PANTHER WAT1-RELATED PROTEIN 10 333 IPR030184 GO:0016020|GO:0022857
Vivi2g02975 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02975 Vivi-Chr2 128385625 128387932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02975 2 355 Nodulin-like Gene Family AT1G75500 54.743 2.06e-139 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02975 - - ccaj:109801260 511.531