Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02958 ATGGCCATGAGAAAATCCAACAAACTTCCACAAGCTGAAGTTATCAAGCAAATTCTCAAAAGATGTTCAAGTTTTGGCAAAAAGCATGGTTATGATGAAGAGGATCTTCCTGATGATGTACCAAAAGGTCATTTTGCAGTTTATGTTGGTGAGAATAGAACAAGGTACATTATTCCAATTTCTTGGCTATCACATCCTCAATTTCAAAGTTTGTTACAAAGAGCTGAAGAGGAGTTTGGTTTCAATCATGATATGGGACTTACTATCCCTTGTGATGAAGTTGTTTTTGAGTCATTAACTTCATTGATGAGATAA 315 0.3524 MAMRKSNKLPQAEVIKQILKRCSSFGKKHGYDEEDLPDDVPKGHFAVYVGENRTRYIIPISWLSHPQFQSLLQRAEEEFGFNHDMGLTIPCDEVVFESLTSLMR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02958 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 37 101 IPR003676 GO:0009733
Vivi2g02958 104 Pfam Auxin responsive protein 27 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02958 Vivi-Chr2 127896047 127896909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02958 3 103 Calmodulin-binding Proteins AT4G34750 45.098 5.16e-23 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02958 K14488 - gmx:100798840 192.971