Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02913 ATGGAACAACCTCAACAACAGCAACAAAATGATCAGGAAAATGGAGGAGGTGGCAGTAGTGGAAAAGGGAGTGGTTTTATGAGCAGACAAAGTAGTACAAGGTGGACACCAACAACAGACCAGATAAGAATATTGAAGGATCTTTACTACAACAATGGAATAAGATCACCAAGTGCTGAACAGATTCAGAGGATCTCTGCTAGGTTAAGACAGTACGGTAAGATTGAAGGAAAAAATGTGTTTTATTGGTTTCAAAACCATAAAGCTAGAGAAAGACAGAAGAAAAGGTTCACTTCTGATGTTAATGTTCTTCCCATCATTCAAAGACCTCCTAATAATATCTCTATTGCTTCTCCTAACTGGAAACCTGATCATGAACAACAACAACAACAACAACAATCCATTCTTCACACCAACCATTCCAATTACAACATTTCATCTTCTGGGCTTTCTTCTGCTTCATGTTCTTCTGCTGAGATGGTTGCTATAGGTTATGGATCTGTGCCTATGGAGAAGAGTTTTAGGTGTTGTACAATATCAGCTGGATGTAGCAGTAGTCAAGTTGGAAGCACCATGAACAACCACTTAGGATGGATTGGTCATCATCATCATCCTCATCATGTTGATCCATATTCTTCTTCACCTTATGCTAATATATTTGAAAAAATAACAACCAATGATGAAATCATGGAAGAAGAAGAATATGAAAATGGTTCACCTGAGATTGAAACCCTTCCTTTATTTCCTATGCATGGTGAAGACATTCATGGTGGATACTGTAACCTGAAATCAAATTCATCTAACTATGCTGCTGCTCATGGTTGGTATCAAGGTGAAGATCATGGTTTCATCAATGCTTCTCGTACTACTTCCTTGGAACTTAGCCTCAACTCTTACACTCGTAGGTCACCAGATTATGCTAATTGA 927 0.383 MEQPQQQQQNDQENGGGGSSGKGSGFMSRQSSTRWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDVNVLPIIQRPPNNISIASPNWKPDHEQQQQQQQSILHTNHSNYNISSSGLSSASCSSAEMVAIGYGSVPMEKSFRCCTISAGCSSSQVGSTMNNHLGWIGHHHHPHHVDPYSSSPYANIFEKITTNDEIMEEEEYENGSPEIETLPLFPMHGEDIHGGYCNLKSNSSNYAAAHGWYQGEDHGFINASRTTSLELSLNSYTRRSPDYAN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02913 308 ProSiteProfiles 'Homeobox' domain profile. 28 94 IPR001356 GO:0003677
Vivi2g02913 308 Gene3D - 27 93 - -
Vivi2g02913 308 MobiDBLite consensus disorder prediction 1 38 - -
Vivi2g02913 308 SUPERFAMILY Homeodomain-like 25 99 IPR009057 -
Vivi2g02913 308 Pfam Homeodomain 32 93 IPR001356 GO:0003677
Vivi2g02913 308 MobiDBLite consensus disorder prediction 115 134 - -
Vivi2g02913 308 CDD homeodomain 33 95 IPR001356 GO:0003677
Vivi2g02913 308 SMART HOX_1 30 98 IPR001356 GO:0003677
Vivi2g02913 308 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 12 300 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02913 Vivi-Chr2 126624716 126626065 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02913 26 258 Wox Gene Family AT2G17950 42.803 1.33e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vivi2g02913 Homeodomain 1.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02913 - - vra:106776674 333.183