Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02905 ATGGGTGTATGTTTCTCTTCCACGAAAGTCGTTAGCGGCTCTAACGGAAACACAACGAATAATGATAACCGTAAACGGAATTCGACGGCTTCCACGGAGACCGGTACCGGGACATCGACGAAGGCGGGAGCGGTGACGGTACAGAAGCATCTGGTGCAGAGCGCTGGTCAGCGGCGGAGAGGGCCGGATGATGGACAGAGGAAAGGTAATCCGAGTCAACAAACGAAGCCGAAGGATAAAGTTGGGTCGCGGATACCGTGTGGGAAGCGGACGGATTTTGGTTATGAGAAGGATTTTGATAAGAGGTTTTCGCTTGGGAAATTGTTGGGACATGGACAGTTTGGGTATACTTATGTTGGAATTGATAAATCTAGTGGAGATCGTGTTGCTGTTAAGAGACTTGAAAAAGCAAAGATGATTCTCCCTATTGCTGTTGAAGATGTAAAGAGAGAGGTCAAGATATTGAAAGAACTTACAGGCCATGAAAACGTGGTTCAGTTCTTTAATGCTTTTGAGGATGATTCGTATGTGTACATAGTTATGGAGTTATGCGAGGGAGGAGAACTACTTGACCGGATATTGGGCAAGAAGGACAGCCGTTATACTGAAAAAGATGCTGCAGTGGTTGTAAGGCAGATGCTGAAGGTTGCAGCTCAATGTCATTTACATGGTTTAGTACATCGCGACATGAAGCCAGAGAATTTTCTTTTCAAATCAAACAGAGAAGATTCAGCTTTAAAGGCTACTGATTTTGGTTTGTCGGATTTCATAAAACCTGGAAAGAGGTTTCCAGATATTGTTGGAAGTGCTTACTACGTCGCACCAGAAGTGTTAAAACGGAAGTCAGGCCCAGAATCGGATGTATGGAGTATTGGTGTGATTACATACATATTGCTTTGTGGGAGACGGCCATTTTGGGATAAGACCGAGGATGGTATCTTCAAGGAGGTCTTACGGAATAAGCCTGATTTCCGGCGGAAACCATGGCCAACCATAAGTACTGCTGCAAAAGATTTTGTGAAGAAATTGTTGGTAAAAGATCCTCGGGCAAGATTAACTGCTGCTCAGGCTCTATCACATCCATGGGTTAGAGAAGGAGGAGAGGCATCCGAGATTCCGATTGATATATCTGTCCTAAATAACATGCGACAGTTTGTAAAGTATAGTCGATTGAAACAATTTGCATTGAGGGCATTGGCCAGCACACTTAATGAAGGTGAGTTTTCAGATCTAAAAGATCAGTTTGATGCAATAGACGTGGACAAAAATGGCGCTATTAGTCTGGAAGAGATGAGACAGGCTCTTGCTAAAGATCTTCCATGGAAGTTGAAAGAATCCCGGGTATTAGAGATACTGCAAGCGATAGATAGCAACACAGATGGACTAGTAGATTTCACCGAGTTTGTAGCAGCTACATTACACGTGCATCAATTGGAGGAACATGACTCTGATAAGTGGCAGCAACGGTCACAGGCTGCTTTTGAGAAATTTGACTTAGATAAGGATGGCTATATTACTCCAGAGGAACTGAGAATGCATACTGGTATGAGAGGCTCCATTGATCCTTTGCTTGAGGAAGCCGACATTGACAAGGATGGCAAGATCAGCTTACCAGAATTCCGGAGACTTTTAAGAACTGCAAGCATTGGTTCTCGAAATATAACAAGCCCGTCTCACCGTCACAGAAGGGCCTAG 1695 0.4413 MGVCFSSTKVVSGSNGNTTNNDNRKRNSTASTETGTGTSTKAGAVTVQKHLVQSAGQRRRGPDDGQRKGNPSQQTKPKDKVGSRIPCGKRTDFGYEKDFDKRFSLGKLLGHGQFGYTYVGIDKSSGDRVAVKRLEKAKMILPIAVEDVKREVKILKELTGHENVVQFFNAFEDDSYVYIVMELCEGGELLDRILGKKDSRYTEKDAAVVVRQMLKVAAQCHLHGLVHRDMKPENFLFKSNREDSALKATDFGLSDFIKPGKRFPDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISTAAKDFVKKLLVKDPRARLTAAQALSHPWVREGGEASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLNEGEFSDLKDQFDAIDVDKNGAISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFTEFVAATLHVHQLEEHDSDKWQQRSQAAFEKFDLDKDGYITPEELRMHTGMRGSIDPLLEEADIDKDGKISLPEFRRLLRTASIGSRNITSPSHRHRRA 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02905 564 ProSitePatterns EF-hand calcium-binding domain. 528 540 IPR018247 -
Vivi2g02905 564 Pfam Protein kinase domain 105 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02905 564 Gene3D - 404 473 - -
Vivi2g02905 564 Gene3D Phosphorylase Kinase; domain 1 96 188 - -
Vivi2g02905 564 MobiDBLite consensus disorder prediction 1 53 - -
Vivi2g02905 564 SMART serkin_6 103 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02905 564 SUPERFAMILY EF-hand 395 546 IPR011992 -
Vivi2g02905 564 Gene3D - 380 543 - -
Vivi2g02905 564 Pfam EF-hand domain pair 408 472 IPR002048 GO:0005509
Vivi2g02905 564 Pfam EF-hand domain pair 491 544 IPR002048 GO:0005509
Vivi2g02905 564 ProSiteProfiles Protein kinase domain profile. 103 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02905 564 ProSiteProfiles EF-hand calcium-binding domain profile. 485 520 IPR002048 GO:0005509
Vivi2g02905 564 SUPERFAMILY Protein kinase-like (PK-like) 100 374 IPR011009 -
Vivi2g02905 564 FunFam calcium-dependent protein kinase 28-like 189 382 - -
Vivi2g02905 564 MobiDBLite consensus disorder prediction 1 89 - -
Vivi2g02905 564 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Vivi2g02905 564 ProSitePatterns EF-hand calcium-binding domain. 419 431 IPR018247 -
Vivi2g02905 564 ProSitePatterns EF-hand calcium-binding domain. 498 510 IPR018247 -
Vivi2g02905 564 ProSitePatterns EF-hand calcium-binding domain. 456 468 IPR018247 -
Vivi2g02905 564 CDD STKc_CAMK 102 362 - -
Vivi2g02905 564 ProSiteProfiles EF-hand calcium-binding domain profile. 523 550 IPR002048 GO:0005509
Vivi2g02905 564 Gene3D Transferase(Phosphotransferase) domain 1 189 370 - -
Vivi2g02905 564 ProSiteProfiles EF-hand calcium-binding domain profile. 406 441 IPR002048 GO:0005509
Vivi2g02905 564 FunFam Calcium-dependent protein kinase 28 404 473 - -
Vivi2g02905 564 SMART efh_1 410 438 IPR002048 GO:0005509
Vivi2g02905 564 SMART efh_1 447 475 IPR002048 GO:0005509
Vivi2g02905 564 SMART efh_1 489 517 IPR002048 GO:0005509
Vivi2g02905 564 SMART efh_1 519 547 IPR002048 GO:0005509
Vivi2g02905 564 FunFam CDPK-related kinase 1 96 188 - -
Vivi2g02905 564 PANTHER SERINE/THREONINE-PROTEIN KINASE 80 532 - -
Vivi2g02905 564 ProSiteProfiles EF-hand calcium-binding domain profile. 443 478 IPR002048 GO:0005509
Vivi2g02905 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02905 Vivi-Chr2 126464285 126470048 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02905 1 557 EF-hand Containing Proteins AT2G17890 75.395 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vivi2g02905 Pkinase 1.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02905 K13412 - gmx:100817249 941.799