Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02902 ATGCTTTCTTCTCTCTCTCTTCCTTCTTCTCTCTACGCCGCCGGCGTTAACACCACCGTATCTCCGCCTCCCTGCCGCGTCAGATATCGGCCGTTTCTCATCACCGCTAGCGCTACCGCCACCGCTGAACCTCGCTCTACATGGACGGAACAACCAAGAGCTTCGTATCTGAACATTAACACGAACACGAACGCTTCTCCTGCTTCGCTCTACGAGATCCTCGGTGTACAAGCAGGTGCTTCTGTACAAGAGATCAAATCTGCGTACCGTCGACTTGCCAGAGTCTGCCACCCTGACGTGGCGGCGAATGACCGGAAAAACTCGTCGGCGGATGACTTCATGAAAATTCACGCTGCTTACTCCACGCTCTCGGATCCTGATAAACGTGCTAATTATGACCGGAGCCTTTTCCGGCGACAACGGCCGTTGTCGATGAGGTCCGGCTACTCTAGTCGGAAATGGGAAACGGATCAGTGCTGGTAG 483 0.5424 MLSSLSLPSSLYAAGVNTTVSPPPCRVRYRPFLITASATATAEPRSTWTEQPRASYLNINTNTNASPASLYEILGVQAGASVQEIKSAYRRLARVCHPDVAANDRKNSSADDFMKIHAAYSTLSDPDKRANYDRSLFRRQRPLSMRSGYSSRKWETDQCW 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02902 160 ProSiteProfiles dnaJ domain profile. 69 136 IPR001623 -
Vivi2g02902 160 Gene3D DnaJ domain 54 151 IPR036869 -
Vivi2g02902 160 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 37 144 - -
Vivi2g02902 160 SUPERFAMILY Chaperone J-domain 68 139 IPR036869 -
Vivi2g02902 160 PRINTS DnaJ domain signature 89 104 IPR001623 -
Vivi2g02902 160 PRINTS DnaJ domain signature 71 89 IPR001623 -
Vivi2g02902 160 PRINTS DnaJ domain signature 108 128 IPR001623 -
Vivi2g02902 160 Pfam DnaJ domain 70 133 IPR001623 -
Vivi2g02902 160 CDD DnaJ 71 125 IPR001623 -
Vivi2g02902 160 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Vivi2g02902 160 SMART dnaj_3 68 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02902 Vivi-Chr2 126389930 126390781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02902 71 133 C2H2 Transcription Factor Family AT1G74250 43.939 2.42e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02902 - - gmx:100800959 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02902 2 126389930 126390781 Vivi2g02902 2 126389930 126390781 ECH