Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02899 ATGGGTGACATAGTGAAACAAATATTAACAAAACCGATCCAGTTAGCAGACCAAGTAACAAAAGCCGCAGATGAAGCAAGTTCCTTCAAGCAAGAATGCGGAGAGCTCAAATCCAAAACGGAGAAGCTCGCCGGTCTTCTCCGGCAAGCCGCCAGAGCGAGCTCCGATCTATACGAACGTCCTACTAAACGGATCATCGAAGAAACCGAACAGGTACTCGACAAAGCACTTTCCTTAGTCCTAAAATGTCGTGCCAATGGTATCATGAAACGTGTCTTCACCATCATCCCTGCCGCAGCCTTCCGTAAAACATCCTCCCATTTAGAAAACTCCATCGGCGATGTTTCATGGCTGCTTCGTGTCTCCGCCCCTGCAGACGACCGTGGTGGCGAGTATCTCGGACTTCCTCCGATCGCGGCCAATGAACCTATTCTATGCTTCATTTGGGAGCAGATCGCTATACTTTACACCGGTTCACAGGAAGATCGCTCCGACGCGGCGGCTTCGCTTGTCTCGCTGGCGCGTGGGAGTGATCGTTATGGGAAGCTTATAATTGAGGAAGGTGGGGTGGGGCCACTTTTGAAGCTGATCAAGGAAGGGAAGATTGATGGACAAGAGAATGCTGCTAGAGCTATTGGGCTTCTTGGTCGTGATGCGGAATGCGTGGAACATATGATTCATGCGGGTGTTTGTTCGGTTTTTGCGAAGATTCTTAAAGAAGGTCCTATGAAAGTTCAAGGTGTTGTTGCTTGGGCTGTTTCTGAGCTTGTTGCTAATTATCCTAAGTGTCAGGATCTTTTTGCTCAGCATAATATTATAAGGTTGCTTGTTGGTCATCTTGCTTTTGAAACAGTTGAAGAACATAGTAAGTATGCTGTTGTTAGCATGAAAGCGACTTCGATTCACGCTGCTGCTGTTGTTATGGCGAATAGTAATAATAATAATAATTCTGGTTCTAATCTTAATCCAAAGAAGGGGAATGAAAATGGAGATGATGGTGTTGGTGGCGGAAACGGAAACAACAAACTAGGTCGCGTGTCGCATCATCCGTTGGGCGAAAGACCTAGAAATCTGCATAGAGTGATCACAAGTACTATGGCGAAACATGCTGCTTCCAAGCCTAGTCAAGGAGATGAAGCAAATCAAAATCAGAACTTTTTGTCCAATTCTAATCCTCCTAATGGCAATGGACTTGGTAATGGTAATGGTAATGGTAATGGTGGTGGTGGTAAGCAAGGAAATCATAATAATCATCAGAGAAATTATTCGCATTCGGGAATTAACATGAAGGGGAGGGAATTTGAAGACGCGGAGACTAAGGCAAGTATGAAGGAAATGGCTGCAAGAGCTCTTTGGCATTTGGCTAAGGATAATGTGATGATTTGTCGCAGCATAACAGAATCAAGGGCTTTGTTGTGTTTTGCTGTTTTACTTGAGAAAGGACCGGAGGCTGTGCAGTACAATTCAGCGATGGCGTTGATGGAGATTACTGCGGTTGCTGAGAAAGATGCTGAATTGAGGAAATCTGCATTTAAGCCTAATTCTCCTGCCTGCAAAGCAGTTGTTGATCAAGTGCTTAAGATAATCGAGAAACCTGATTCGGATCTCCTCATTCCTTGCGTCAAGGCGATTGGGAATTTGGCAAGGACATTCAAGGCCACCGAGACAAGAATGATTGGTCCATTGGTGAAACTTCTTGATGAAGGGGAGGCAGAGGTTTCCAGAGAGGCGGCAATCGCGCTCAGGAAATTTGCGGGAAGTGAAAACTACCTTCATGTTGATCACTCCAAGGCAATTATTAGCGCAGGTGGCGCAAAACATTTGATTCAGCTTGTTTATTTCGGAGAACATCAGGTTCCAGCATTGGTTCTGCTCTCCTACATTGCATTGCACGTGCCGGATAGCGAAGAACTCGCTCTTGCTGAGGTTCTTGGAGTGCTTGAATGGGCATCCAAGCAATCTTTCATGCAACATGAGGAAACCCTTGAGGCATTGTTGCAAGAAGCCAAAAGTAGGTTGGAGCTTTATCAATCTAGAGGTTCAAGAGGATTTCATCATAAATTGCATCAGTAG 2073 0.4534 MGDIVKQILTKPIQLADQVTKAADEASSFKQECGELKSKTEKLAGLLRQAARASSDLYERPTKRIIEETEQVLDKALSLVLKCRANGIMKRVFTIIPAAAFRKTSSHLENSIGDVSWLLRVSAPADDRGGEYLGLPPIAANEPILCFIWEQIAILYTGSQEDRSDAAASLVSLARGSDRYGKLIIEEGGVGPLLKLIKEGKIDGQENAARAIGLLGRDAECVEHMIHAGVCSVFAKILKEGPMKVQGVVAWAVSELVANYPKCQDLFAQHNIIRLLVGHLAFETVEEHSKYAVVSMKATSIHAAAVVMANSNNNNNSGSNLNPKKGNENGDDGVGGGNGNNKLGRVSHHPLGERPRNLHRVITSTMAKHAASKPSQGDEANQNQNFLSNSNPPNGNGLGNGNGNGNGGGGKQGNHNNHQRNYSHSGINMKGREFEDAETKASMKEMAARALWHLAKDNVMICRSITESRALLCFAVLLEKGPEAVQYNSAMALMEITAVAEKDAELRKSAFKPNSPACKAVVDQVLKIIEKPDSDLLIPCVKAIGNLARTFKATETRMIGPLVKLLDEGEAEVSREAAIALRKFAGSENYLHVDHSKAIISAGGAKHLIQLVYFGEHQVPALVLLSYIALHVPDSEELALAEVLGVLEWASKQSFMQHEETLEALLQEAKSRLELYQSRGSRGFHHKLHQ 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02899 690 SMART arm_5 177 217 IPR000225 GO:0005515
Vivi2g02899 690 SMART arm_5 592 630 IPR000225 GO:0005515
Vivi2g02899 690 SMART arm_5 458 498 IPR000225 GO:0005515
Vivi2g02899 690 SMART arm_5 514 549 IPR000225 GO:0005515
Vivi2g02899 690 SMART arm_5 218 258 IPR000225 GO:0005515
Vivi2g02899 690 MobiDBLite consensus disorder prediction 312 430 - -
Vivi2g02899 690 Pfam Armadillo/beta-catenin-like repeat 183 214 IPR000225 GO:0005515
Vivi2g02899 690 Gene3D - 412 512 IPR011989 -
Vivi2g02899 690 MobiDBLite consensus disorder prediction 312 326 - -
Vivi2g02899 690 FunFam Armadillo repeat only 4 2 121 - -
Vivi2g02899 690 MobiDBLite consensus disorder prediction 368 426 - -
Vivi2g02899 690 Gene3D - 3 121 IPR036537 GO:0007166
Vivi2g02899 690 Gene3D - 513 667 IPR011989 -
Vivi2g02899 690 Gene3D - 148 320 IPR011989 -
Vivi2g02899 690 FunFam Armadillo repeat only 2 150 320 - -
Vivi2g02899 690 PANTHER ARMADILLO REPEAT ONLY 4 1 681 - -
Vivi2g02899 690 Coils Coil 659 679 - -
Vivi2g02899 690 SUPERFAMILY ARM repeat 153 635 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02899 Vivi-Chr2 126242595 126245414 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02899 - - vvo:131652026 1234.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02899 2 126242595 126245414 Vivi2g02899 2 126242595 126245414 ECH
Vivi2g02899 2 126242595 126245414 Vivi1g03138 1 68822721 68825255 PCT