Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02893 ATGTTTTTATTCTCTAGTAACTTTGTTGCTGAAAAATGGCTAGGATTTGTGACAGCCATATGGGTACAAACAATATGTGGAAACAATTATACATTTGCAAACTATTCTGATGTGTTGAAGTCTCTAATGTTTCTGACTCAGATGCAGCTTAACAATCTCTCTGTTGCTAAAGACGTTGGCAAAGCTTTTGGTATTTTCTCTGGTCTTGTTTCGGATCGTTGGCCAACTTCTGTTATTCTCATGATTGGTGCTATCATGGGGTTCATTGGCTACGGTGTTCAATGGCTTGTTGTAAGCCAAAGAATCACCCCTCTCCCTTATTGGCTGATGTGTGTATTCTTATGTTTGGGAGGAAACAGCTCAACATGGATGAACACAGCAGTGCTTGTAACTTGCATGAGAAGCTTCTCGAAAAACCGCGGTCCAGTTTCTGGTATTCTTAAAGGGTATTTAGGACTCAGCACAGCAATCTTCACTGACGTCTGCACAGCTTTGTTTTCCTCGGATCCATCGAAGTTTCTATTAATGCTCACAATTGTTCCTGCTGTTATTTGTCTCATTGCTGCTATTTTTCTTCGTGAAACTCCATCAGCTTCTACTTCTACAGAAGAAAACCAAGAGACAAGGTTCTTCAATGTGTTTAACTTGATTGCAGTTACAGTAGCAGTTTATCTCTTGGTTTTTGATATCTCTGGACCTCATAAACATCTTGTTTCATTGGTTTTCACAATAGGACTTTTGATCCTATTAGCCATGCCACTTCTTGTTCCTTTATATTTACTTTTCTTCAAAATTAGTCCTAGTCTTGACAAAGAAAAACAGATTCATGAGCCATTGTTGACTCAAAAGATTGAAAAGGAAGAGCCATGTCCCAAGGTGGAGGAAGTTGAGATTAAACGAAAACCGGTGTTAGGGGAAGATCATACTATCATTGAAATGGCGAAAACCGTTGATTTTTGGGTTTTGTTTTTGTCATTTCTATGCGGTGTGGGAACAGGACTTTGTGTTATGAATAACATGGGACAAATGGGATTAGCACTTGGATACCATGATGTTTCTTTGTTCATTTCTTTCATTAGCATTTGGGGTTTCTTTGGACGCATTCTTTCTGGTTCACTCTCTGAATACTACATCAGAAAATCGGGCATGCCGAGGCTAGTTTGGAATGCAGCAGCACAAATTCTGATGGCTGTTGGTTACATTACATTGGCTATGGCCTTACCGGGATCATTATACATTGGCTCGATGCTAGTTGGAATATGCTATGGAGTTCGTCTTACAATAACACCAGCAGCAGCTTCAGAACTATTTGGTCTGAAATACTATGGTTTATTATACAACATTCTGATTCTCAACCTTCCTATTGGTTCATTCATCTTTTCTGGTCTCATTGCTGGTTATCTATATGATCTTGAAGCCACTAGTGTGCCGGGAGGTGGAAACACTTGCATTGGAGCACATTGTTTCAGGCTTGTGTATTTGATTATGGCTTTTGCTTGTGTCTTGGGGTGTGGATTGGATCTTTTGCTTTCTGTTAGAACAAAGAAGATATATTCCAAGATACATATAGAGAGAAATCTTGTCAACCCAATACTAAGATGA 1602 0.392 MFLFSSNFVAEKWLGFVTAIWVQTICGNNYTFANYSDVLKSLMFLTQMQLNNLSVAKDVGKAFGIFSGLVSDRWPTSVILMIGAIMGFIGYGVQWLVVSQRITPLPYWLMCVFLCLGGNSSTWMNTAVLVTCMRSFSKNRGPVSGILKGYLGLSTAIFTDVCTALFSSDPSKFLLMLTIVPAVICLIAAIFLRETPSASTSTEENQETRFFNVFNLIAVTVAVYLLVFDISGPHKHLVSLVFTIGLLILLAMPLLVPLYLLFFKISPSLDKEKQIHEPLLTQKIEKEEPCPKVEEVEIKRKPVLGEDHTIIEMAKTVDFWVLFLSFLCGVGTGLCVMNNMGQMGLALGYHDVSLFISFISIWGFFGRILSGSLSEYYIRKSGMPRLVWNAAAQILMAVGYITLAMALPGSLYIGSMLVGICYGVRLTITPAAASELFGLKYYGLLYNILILNLPIGSFIFSGLIAGYLYDLEATSVPGGGNTCIGAHCFRLVYLIMAFACVLGCGLDLLLSVRTKKIYSKIHIERNLVNPILR 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02893 533 CDD MFS_Mch1p_like 12 504 - -
Vivi2g02893 533 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 519 - -
Vivi2g02893 533 SUPERFAMILY MFS general substrate transporter 28 516 IPR036259 -
Vivi2g02893 533 Gene3D MFS general substrate transporter like domains 308 516 IPR036259 -
Vivi2g02893 533 Gene3D MFS general substrate transporter like domains 12 206 IPR036259 -
Vivi2g02893 533 Pfam Nodulin-like 12 258 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02893 Vivi-Chr2 126064173 126066705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02893 10 526 Nodulin-like Gene Family AT4G34950 63.853 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02893 - - rcu:8260661 723.005