Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02892 ATGGACGACGGAGATTCGAGATTCAAGCTCGGTGATTCGGGTCCGTATTTTTTCATCATTGGCAATATTGATCATTGTAAACAAGGGCAAAAGATTATTGTTTTAGTCATGGCAGTTAGACACCGTAACCCTCCTCCTACCGTGGTTGCAGCCCCGTCTCCCGTAAGTGGCTTGTCGCCACCTCTGATTCACAAGTCCGCTTTGGATGCTCCGGCGCCGTCTCCGTCGAAAGCAAGTTCGGTGGGTTTTGGTGTTGTGGTTTGGGTTGGTTTGATATACAATTCTACTGCTGCGACTGACAAAACAGTCTCTACTATTGAAAAACCTGTATAG 333 0.4715 MDDGDSRFKLGDSGPYFFIIGNIDHCKQGQKIIVLVMAVRHRNPPPTVVAAPSPVSGLSPPLIHKSALDAPAPSPSKASSVGFGVVVWVGLIYNSTAATDKTVSTIEKPV 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02892 110 SUPERFAMILY Cupredoxins 2 37 IPR008972 -
Vivi2g02892 110 Gene3D - 1 41 IPR008972 -
Vivi2g02892 110 ProSiteProfiles Phytocyanin domain profile. 1 38 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02892 Vivi-Chr2 126052469 126052801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02892 1 92 Phytocyanin Superfamily AT4G28365 40.000 2.45e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02892 - - vvo:131649955 203.756