Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02881 ATGGAAGAGGTTTGGAAAGACATCAACATGTCTTCATTGAATGAACAAAACACACGACGACCCATGATTATGAGTACCCGTGATTCCTCCACTTTTGGTGGTGTTATCCTTCAAGACTTTCTCGCTCGACCAAAAAGCATTGATCATCATTATTCTTCTAATAACTCATCTTCTTCTGTTCCCTCAGATCAAAATCCTTCTTTTTATTGCCCTACTGTTTCAACTGCCCCACCACCTCTTGTCACTGCTCTCAGCTTAAACTCTCGTCCTGATCATTTTCCTTTCGACCCTCTTATCAGACAAACCAATGATAACAATTCTCACTCACTTGTTCAACAACAACACCAACATCATCATCGACAACAAAGAAATATTACTGCTCCAAAGGTTTCTCATGTCGTAAATCCCTCACCATTTGATCCAAACGTGGGTGTTGTATCAAATGCTTTCACTTGTTTTGGAAAGAGGTTTGGTGAACCTGATGTTAGTCCTGGTGAAAGGAGAAACAAGAGAATGATCAAGAATCGTGAATCTGCTGCACGTTCACGAGCTAGAAAACAGGCTTACACGAACGAACTGGAGCTAAAAGTTGATTTATTGATGGAAGAAAATGCAAAGCTCAGAAGACAACAACAAGAGTTATGGGAAGCGGCAAGTAATGCACCAAAGAAGAATAGCTTACAACGAACATTAACAGCTCCATTTTAA 708 0.4011 MEEVWKDINMSSLNEQNTRRPMIMSTRDSSTFGGVILQDFLARPKSIDHHYSSNNSSSSVPSDQNPSFYCPTVSTAPPPLVTALSLNSRPDHFPFDPLIRQTNDNNSHSLVQQQHQHHHRQQRNITAPKVSHVVNPSPFDPNVGVVSNAFTCFGKRFGEPDVSPGERRNKRMIKNRESAARSRARKQAYTNELELKVDLLMEENAKLRRQQQELWEAASNAPKKNSLQRTLTAPF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02881 235 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 234 IPR043452 GO:0003700|GO:0045893
Vivi2g02881 235 MobiDBLite consensus disorder prediction 48 71 - -
Vivi2g02881 235 SMART brlzneu 163 227 IPR004827 GO:0003700|GO:0006355
Vivi2g02881 235 CDD bZIP_plant_BZIP46 167 214 - -
Vivi2g02881 235 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 165 214 IPR004827 GO:0003700|GO:0006355
Vivi2g02881 235 Pfam bZIP transcription factor 167 219 IPR004827 GO:0003700|GO:0006355
Vivi2g02881 235 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 165 222 - -
Vivi2g02881 235 Coils Coil 190 210 - -
Vivi2g02881 235 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 170 185 IPR004827 GO:0003700|GO:0006355
Vivi2g02881 235 SUPERFAMILY Leucine zipper domain 167 216 IPR046347 GO:0003700|GO:0006355
Vivi2g02881 235 Gene3D - 165 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02881 Vivi-Chr2 125727380 125728303 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02881 143 235 bZIP Transcription Factor Family AT3G56850 52.041 4.24e-18 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi2g02881 bZIP_1 4.6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02881 K14432 - qsa:O6P43_033579 170.629