Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02850 ATGGCGGAAACCGGCGCTGACGGAAACGGTTTTACATCTCTCCACGGCGACTTGGACTTGACGATAATTGCCGCTCGCCGGTTACCTAACATGGACATCGTCTCCGAGCGTTTCCGTCGCTGTGTTACCGCTTGCGATACTATTAAATACAATTCGACTTCTGATGCGGCGGAGGAGATCACTCATAAGGAGCACCGACATCGGAGAAAGATTATAACTAGTGATCCTTATGTCACTGTTATGGTGCCGCAAGCTACGGTTGCACGGACGCGAGTGCTTAAGAACTCGCCCAATCCTGAGTGGAAGGAACGGTTTTACATTCCGTTAGCACATTTGGTTGCCGATTTGGAGTTTCGTGTTAAGGATGATGATGTTTTTGGTTCTCAAACTATGGGGACAGTTAAGATTCCGGCTCAGCAAATTGCCACCGGCGAGGTTATTTCCGGTTGGTTTCCTATTCTTGGGACCAATGGTAAACCGGCAAAACCGGACACTGCGCTTCATTTGGAAATGAAGTTCACGCCGGTGGACCAGAATCCTCTTTACCTCCGGGGCATTGCGGCTGATCCCGAGCACAAAGGCGTGAGGCACACGTATTTTCCGGTGAGGAAGGGGAGTTTGGTGAGGCTTTACCAAGACGCACATTGTCCCCACGGGACTGTACCGGAGATTGAGCTTGATGATGGTAACGTTTATAAACCGGAGAATTGTTGGGAAGATATATGTTATGCTATAACAGAAGCTCATCACATGGTTTATTTAGTGGGTTGGTCAATCTACCATAAAGTGAAGCTTGTTAGGGAACCTTCTAGACCTCTGCCGCGAGGTGGGGATTTAACACTTGGTGAATTACTCAAGTATAAGTCTGAAGAAGGAGTGAGAGTTTTATTGCTTGTCTGGGATGACAAAACTTCCCATGATAAGCTCTTCTTCAAGTCGACGGGAGTAATGGAGACTCATGATGAGGAAACAAAGAAGTTTTTCAAACATTCGTCTGTCATGTGTGTTTTGGCGCCTCGCTATGCTAGCAGTAAGATGAGCTTCATTAAGCAACAGGTTGTTGGAACTGTCTTCACACACCACCAAAAATGTGTTATTGTGGACACACAAGCTTCTGGTAATAACAGAAGGATATCCACTTTTATAGGAGGTCTTGATTTGTGTGATGGTCGCTATGACACACCCGAGCATCGACTTTTTCGTGATCTCGATACTGTATTTGACGGTGATTTCCACAATCCTACATTTCCCTCTGGAACAAGGGCTCCTAGACAACCATGGCATGATTTGCACTGCAGAATTGATGGACCTGCTGCATATGATATTCTTATTAATTTTGAACAACGATGGAGAAAAGCAACTAAGTGGAAAGAGTTTGCATTTCTTTTTAAAAAAGCTTCTCAGTGGAATGACGATGCTTTAATAAGAGTAGAACGCATCTCATGGATATTAAGTCCTTCTCATCGTACCTCAAAGGATGATTATACAACTGTTCCAGGGGATGATCCTTTAGTATGTGTTTCTAAAGAAGATAATCCTGAAAACTGGCATGTCCAGATCTTCCGCTCCATTGACTCAGGATCCTTGAAAGGATTTCCCAAACGTGTTGATGTTGCTCTATCCCAGAATCTCATTTGTGCTAAAAATTTGGTTATAGACAAAAGCATTCAAACAGGGTACATCCAAGCTATCAGATCTGCTCAACATTTCATTTATATTGAAAACCAATACTTCATCGGATCTTCATATGCATGGCCATCTTACAAAGATGCAGGGGCTGATAATCTTATCCCAATGGAATTGGCACTGAAAATAGCTAGTAAAATCAGAGCTAATGAGAGGTTTGCTATTTATATTGTTTTACCAATGTGGCCAGAAGGTGATCCTAAATCTGGAGCTGTGCAAGAAATTCTTTTCTGGCAGGGTCAGACAATGCAAATGATGTATACTGTTGTTGCTAAAGAATTGAAAGCAATGCAACTTAATGACGTGCACCCACAAGATTACCTCAATTTCTATTGCCTTGGTAATCGAGAAGACTTCAATGAAGAAAGCTCGGGCACAAATGGTGCACCGATCTCCGGAGCATATAAATATCGCCGAAATATGATTTATGTGCATGCCAAGGGGATGATCGTGGATGATGAATATGTTATAGTGGGATCTGCTAACATAAACCAAAGATCTATGGCTGGTACTAAAGATACTGAGATAGCTATGGGTTCATATCAACCTCATTACACATGGTCTGCGAGGAAAAGACATCCACACGGACAGATTTATGGTTACAGAATGTCACTTTGGGCAGAACATCTTGGAATGTTAGATGAAACTTTTAAAGAGCCGGAGAGATTGGAGTGTGTACGGAAAGTGAATGAAATTGCAAACAATAATTGGAGAATTTACTCTTCTGACGAATTGTCACTTATACAGGGACATCTTCTTAAGTATCCCGTAAAAATTGATTCTGATGGGCTGGTCAGCTCATTACCTGACTGTGACAGTTTCCCTGATGCCGGTGGTAAGATATTGGGGGCTCATTCCGCCACAATTCCAGATATCCTAACAACATAA 2574 0.4289 MAETGADGNGFTSLHGDLDLTIIAARRLPNMDIVSERFRRCVTACDTIKYNSTSDAAEEITHKEHRHRRKIITSDPYVTVMVPQATVARTRVLKNSPNPEWKERFYIPLAHLVADLEFRVKDDDVFGSQTMGTVKIPAQQIATGEVISGWFPILGTNGKPAKPDTALHLEMKFTPVDQNPLYLRGIAADPEHKGVRHTYFPVRKGSLVRLYQDAHCPHGTVPEIELDDGNVYKPENCWEDICYAITEAHHMVYLVGWSIYHKVKLVREPSRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLFFKSTGVMETHDEETKKFFKHSSVMCVLAPRYASSKMSFIKQQVVGTVFTHHQKCVIVDTQASGNNRRISTFIGGLDLCDGRYDTPEHRLFRDLDTVFDGDFHNPTFPSGTRAPRQPWHDLHCRIDGPAAYDILINFEQRWRKATKWKEFAFLFKKASQWNDDALIRVERISWILSPSHRTSKDDYTTVPGDDPLVCVSKEDNPENWHVQIFRSIDSGSLKGFPKRVDVALSQNLICAKNLVIDKSIQTGYIQAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKIASKIRANERFAIYIVLPMWPEGDPKSGAVQEILFWQGQTMQMMYTVVAKELKAMQLNDVHPQDYLNFYCLGNREDFNEESSGTNGAPISGAYKYRRNMIYVHAKGMIVDDEYVIVGSANINQRSMAGTKDTEIAMGSYQPHYTWSARKRHPHGQIYGYRMSLWAEHLGMLDETFKEPERLECVRKVNEIANNNWRIYSSDELSLIQGHLLKYPVKIDSDGLVSSLPDCDSFPDAGGKILGAHSATIPDILTT 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02850 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 356 391 IPR001736 GO:0003824
Vivi2g02850 857 Pfam C2 domain 16 153 IPR000008 -
Vivi2g02850 857 PIRSF PLD_plant 4 857 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Vivi2g02850 857 FunFam Phospholipase D delta 228 472 - -
Vivi2g02850 857 Pfam Phospholipase D Active site motif 356 391 IPR001736 GO:0003824
Vivi2g02850 857 Pfam Phospholipase D Active site motif 702 729 IPR001736 GO:0003824
Vivi2g02850 857 SUPERFAMILY Phospholipase D/nuclease 553 787 - -
Vivi2g02850 857 ProSiteProfiles C2 domain profile. 1 151 IPR000008 -
Vivi2g02850 857 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 176 IPR035892 -
Vivi2g02850 857 SUPERFAMILY Phospholipase D/nuclease 195 462 - -
Vivi2g02850 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 702 729 IPR001736 GO:0003824
Vivi2g02850 857 SMART pld_4 702 729 IPR001736 GO:0003824
Vivi2g02850 857 SMART pld_4 356 391 IPR001736 GO:0003824
Vivi2g02850 857 Gene3D Endonuclease Chain A 527 748 - -
Vivi2g02850 857 CDD C2_plant_PLD 14 174 - -
Vivi2g02850 857 PANTHER PHOSPHOLIPASE D 13 845 IPR015679 -
Vivi2g02850 857 Gene3D C2 domain 14 186 IPR035892 -
Vivi2g02850 857 SMART C2_3c 17 150 IPR000008 -
Vivi2g02850 857 Gene3D Endonuclease Chain A 225 475 - -
Vivi2g02850 857 Pfam Phospholipase D C terminal 776 846 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02850 Vivi-Chr2 125206612 125219446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02850 14 693 Phospholipase D Gene Family (Wang group) AT4G35790 70.803 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02850 K01115 - gmx:100814486 1491.48