Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02795 ATGAAGGATTCTGAGAAATGTTCCAACTCAAACGCTATTGAATCCGATGTTTCTCAAGAAGCTAGAAAAGTTGGGCAGAATAGAAGAGCTTTGGGGGTGATTAACCATAATATGATTCCTAACAAGAGGGCTGTATCAGAAAGAAATGAAGTTTGTGAAAAGAAACAAGGGGATCCGGTGCATCGACCCATCACTAGGAGGTTTGCTGCGAAAATTGCTAGCACGCAAAAACTTAAGGCGGCTGAGGGGACGACGAAAAGGTCAAACTTGACTAGTTCGAATGGATTTGGAGATTGTATATTTGTTGATGATGAGCATAAGCTGGCGGAGGACCAGCCTGTGCCAATGGCTTTAGAGAAAACTGAACCTATGCGAAATGAGTCAGATGAGATGGATGAAGTTGAGATGGAGGATATGATGGATGAGCCTGTTATGGACATTGACATCTCTGATGCAAATGACCCTCTTGCAGTTTCTGAATATATTGATGATCTTTATGCTTACTACAGAAAAGTTGAGAGTACTGGCTGTGTCTCACCAAATTATATGGCTGATCAATTCGACATTAATGAAAGAATGAGGGCCATACTGATTGATTGGCTTGTTGAGGTGCACGACAAATTTGACCTGGTTCATGAGACATTGTTTCTCACAGTTAATCTTATAGACAGATTTTTGGAAAAGCAGTCAGTGGTTAGAAAGAAGCTTCAGCTGGTTGGTCTAGTGGCAATGCTTTTGGCATGCAAGTATGAGGAAGTTTCTGTGCCTGTGGTTGGAGATCTAATTCTAATATCAGACAGAGCATACAGTAGGAAAGAAGTTCTTGAAATGGAGAAGTTGATGGTCAACACATTGAAGTTTAACATATCTGTGCCAACAGCATATGTTTTCATTAGAAGGTTCCTAAAGGCAGCTCAAGCAGACAGAAAACTTGAGCTGCTAGCTTTCTTCTTGGTAGAGCTATCTCTAGTAGAATATGCAATGTTGAAGTTCCCTCCTTCTCAGCTAGCTGCAGCTGCTGTCTATACCGCTCAATGTGCTACCAATGGTTTCAAACAGTGGAGTAAGACATGTGAATGGCACACCAACTACTCAGAAGATCAACTATTAGAGTGCTCTAGTTTAATGGTTGATTTTCACAAGAAGGCTGGGACAGGGAAACTTACAGGGGCACATCGGAAGTATTGCACATCAAAATTTATCTTTACTGCAAAATGTGAACCAGCAAGTTTTCTTCTAGAGAACTAG 1248 0.4111 MKDSEKCSNSNAIESDVSQEARKVGQNRRALGVINHNMIPNKRAVSERNEVCEKKQGDPVHRPITRRFAAKIASTQKLKAAEGTTKRSNLTSSNGFGDCIFVDDEHKLAEDQPVPMALEKTEPMRNESDEMDEVEMEDMMDEPVMDIDISDANDPLAVSEYIDDLYAYYRKVESTGCVSPNYMADQFDINERMRAILIDWLVEVHDKFDLVHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDRAYSRKEVLEMEKLMVNTLKFNISVPTAYVFIRRFLKAAQADRKLELLAFFLVELSLVEYAMLKFPPSQLAAAAVYTAQCATNGFKQWSKTCEWHTNYSEDQLLECSSLMVDFHKKAGTGKLTGAHRKYCTSKFIFTAKCEPASFLLEN 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02795 415 Gene3D - 178 290 - -
Vivi2g02795 415 SUPERFAMILY Cyclin-like 291 409 IPR036915 -
Vivi2g02795 415 SMART cyclin_7 199 283 IPR013763 -
Vivi2g02795 415 SMART cyclin_7 296 378 IPR013763 -
Vivi2g02795 415 FunFam G2/mitotic-specific cyclin-1 279 404 - -
Vivi2g02795 415 SUPERFAMILY Cyclin-like 153 289 IPR036915 -
Vivi2g02795 415 Gene3D - 164 401 - -
Vivi2g02795 415 Pfam Cyclin, C-terminal domain 292 407 IPR004367 -
Vivi2g02795 415 Pfam Cyclin, N-terminal domain 164 290 IPR006671 -
Vivi2g02795 415 PANTHER CYCLINS 122 381 IPR039361 -
Vivi2g02795 415 CDD CYCLIN_AtCycB-like_rpt1 142 287 - -
Vivi2g02795 415 SMART Cyclin_C_2 292 409 IPR004367 -
Vivi2g02795 415 PIRSF Cyclin_A_B_D_E 1 415 IPR046965 GO:0016538|GO:0044772
Vivi2g02795 415 MobiDBLite consensus disorder prediction 1 26 - -
Vivi2g02795 415 CDD CYCLIN_AtCycB-like_rpt2 292 408 - -
Vivi2g02795 415 ProSitePatterns Cyclins signature. 194 225 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02795 Vivi-Chr2 123845667 123849188 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02795 24 413 Core Cell Cycle Gene Families AT1G20610 57.855 1.03e-164 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02795 K21777 - gmx:100798068 596.66