Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02794 ATGAAGGATTCTGAGAAATGTTCCAACTCAAACGCTATTGAATCCGATGTTTCTCAAGGGTTAGAAGCTAGAAAAGTTGGGCAGAATAGAAGAGCTTTGGGGGTGATTAACCATAATATGATTCCTAACAAGAGGGCTGTATCAGAAAGAAATGAAGTTTGTGAAAAGAAACAAGGGGATCCGGTGCATCGACCCATCACTAGGAGGTTTGCTGCGAAAATTGCTAGCACGCAAAAACTTAAGGCGGCTGAGGGGACGACGAAAAGGTCAAACTTGACTAGTTCGAATGGATTTGGAGATTGTATATTTGTTGATGATGAGCATAAGCTGGCGGAGGACCAGCCTGTGCCAATGGCTTTAGAGAAAACTGAACCTATGCGAAATGAGTCAGATGAGATGGATGAAGTTGAGATGGAGGATATGATGGATGAGCCTGTTATGGACATTGACATCTCTGATGCAAATGACCCTCTTGCAGTTTCTGAATATATTGATGATCTTTATGCTTACTACAGAAAAGTTGAGAGTACTGGCTGTGTCTCACCAAATTATATGGCTGATCAATTCGACATTAATGAAAGAATGAGGGCCATACTGATTGATTGGCTTGTTGAGGTGCACGACAAATTTGACCTGGTTCATGAGACATTGTTTCTCACAGTTAATCTTATAGACAGATTTTTGGAAAAGCAGTCAGTGGTTAGAAAGAAGCTTCAGCTGGTTGGTCTAGTGGCAATGCTTTTGGCATGCAAGTATGAGGAAGTTTCTGTGCCTGTGGTTGGAGATCTAATTCTAATATCAGACAGAGCATACAGTAGGAAAGAAGTTCTTGAAATGGAGAAGTTGATGGTCAACACATTGAAGTTTAACATATCTGTGCCAACAGCATATGTTTTCATTAGAAGGTTCCTAAAGGCAGCTCAAGCAGACAGAAAACTTGAGCTGCTAGCTTTCTTCTTGGTAGAGCTATCTCTAGTAGAATATGCAATGTTGAAGTTCCCTCCTTCTCAGCTAGCTGCAGCTGCTGTCTATACCGCTCAATGTGCTACCAATGGTTTCAAACAGTGGAGTAAGACATGTGAATGGCACACCAACTACTCAGAAGATCAACTATTAGAGTGCTCTAGTTTAATGGTTGATTTTCACAAGAAGGCTGGGACAGGGAAACTTACAGGGGCACATCGGAAGTATTGCACATCAAAATTTATCTTTACTGCAAAATGTGAACCAGCAAGTTTTCTTCTAGAGAACTAG 1254 0.4115 MKDSEKCSNSNAIESDVSQGLEARKVGQNRRALGVINHNMIPNKRAVSERNEVCEKKQGDPVHRPITRRFAAKIASTQKLKAAEGTTKRSNLTSSNGFGDCIFVDDEHKLAEDQPVPMALEKTEPMRNESDEMDEVEMEDMMDEPVMDIDISDANDPLAVSEYIDDLYAYYRKVESTGCVSPNYMADQFDINERMRAILIDWLVEVHDKFDLVHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDRAYSRKEVLEMEKLMVNTLKFNISVPTAYVFIRRFLKAAQADRKLELLAFFLVELSLVEYAMLKFPPSQLAAAAVYTAQCATNGFKQWSKTCEWHTNYSEDQLLECSSLMVDFHKKAGTGKLTGAHRKYCTSKFIFTAKCEPASFLLEN 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02794 417 PANTHER CYCLINS 125 383 IPR039361 -
Vivi2g02794 417 SMART Cyclin_C_2 294 411 IPR004367 -
Vivi2g02794 417 Gene3D - 180 292 - -
Vivi2g02794 417 CDD CYCLIN_AtCycB-like_rpt2 294 410 - -
Vivi2g02794 417 SUPERFAMILY Cyclin-like 155 291 IPR036915 -
Vivi2g02794 417 SUPERFAMILY Cyclin-like 293 411 IPR036915 -
Vivi2g02794 417 PIRSF Cyclin_A_B_D_E 2 417 IPR046965 GO:0016538|GO:0044772
Vivi2g02794 417 Gene3D - 166 403 - -
Vivi2g02794 417 SMART cyclin_7 201 285 IPR013763 -
Vivi2g02794 417 SMART cyclin_7 298 380 IPR013763 -
Vivi2g02794 417 ProSitePatterns Cyclins signature. 196 227 IPR006671 -
Vivi2g02794 417 Pfam Cyclin, C-terminal domain 294 409 IPR004367 -
Vivi2g02794 417 FunFam G2/mitotic-specific cyclin-1 281 406 - -
Vivi2g02794 417 Pfam Cyclin, N-terminal domain 166 292 IPR006671 -
Vivi2g02794 417 CDD CYCLIN_AtCycB-like_rpt1 144 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02794 Vivi-Chr2 123845655 123849188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02794 26 415 Core Cell Cycle Gene Families AT1G20610 57.855 9.84e-165 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02794 K21777 - gmx:100798068 598.971