Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02789 ATGGATTCTTCCAAGAACACAGCAACTTCTACCCCAAACAACTCTCCCCCGGTTTCCCCTCCACACCCTCCCTCTGAACATGATAACACCCCCACTGAAACAAACCCTATCCCTGAGGGTTCTTCTGAAAATGTTATCATGAAAACAGCGGAAGAAGTTTGGGCTGACTTAACTGCGGGTGATGATGGAAATGAAGGAGGTGATGGTGGTAACAAAGACGGTGGAGCCCAAGATGGTAGTGCTTCTAGGCCTGTGGCGATCGCTGTTACTGCGGACGGAGCAAATGTGCCTGTGATGAGGAGTGGTGGTGCTGTTGGTGGTAGAACTAAGGGTTCGGGTTCGAAGAAAAGAAAAAGTAATCAAGTGAAAGACCCTCCTCGAGGAACTCCTACTTGTCCAGAATGCAATAGACAGTTTGCGACATGGAAGGCAGCGTTTGGACATATGAGAAAACATCCCGAACGCCGACACCGTGGTTTTTTTCCGCCACCTACTTTTGAATCACCACAAGTGCCTGCGGCTGCGGCTGAGGGTGATGGTGGTAATCAGGTCGATGATGAAGAAGTACAACATGTTGTAAGAGGACTTGTGATGGATCTAAACCAATCCCTTGGAGCGGAGGAAGGGTCTTCTGCTGGCGGCGACAGTGCTAGAAAAAGGAGGAACCAACCAGCCTCATCTGAAGCAGCACTTGAACCACCACCGGGGTCCTCAGCCCCATCAGAGAGTAGGAATAGGAGAAATGAACCGGCACCACCTGCAGTGGATGATGAACAAAATGAGGAGGGAAGAAACAAAGGTTTTGATTTGAACAAATTACCTTCATCTGATGATGAGGAAGAAATCGGAGAGAATTGA 858 0.4895 MDSSKNTATSTPNNSPPVSPPHPPSEHDNTPTETNPIPEGSSENVIMKTAEEVWADLTAGDDGNEGGDGGNKDGGAQDGSASRPVAIAVTADGANVPVMRSGGAVGGRTKGSGSKKRKSNQVKDPPRGTPTCPECNRQFATWKAAFGHMRKHPERRHRGFFPPPTFESPQVPAAAAEGDGGNQVDDEEVQHVVRGLVMDLNQSLGAEEGSSAGGDSARKRRNQPASSEAALEPPPGSSAPSESRNRRNEPAPPAVDDEQNEEGRNKGFDLNKLPSSDDEEEIGEN 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02789 285 ProSiteProfiles Zinc finger C2H2 type domain profile. 130 157 IPR013087 -
Vivi2g02789 285 MobiDBLite consensus disorder prediction 249 278 - -
Vivi2g02789 285 MobiDBLite consensus disorder prediction 149 285 - -
Vivi2g02789 285 ProSitePatterns Zinc finger C2H2 type domain signature. 132 152 IPR013087 -
Vivi2g02789 285 MobiDBLite consensus disorder prediction 1 135 - -
Vivi2g02789 285 MobiDBLite consensus disorder prediction 28 42 - -
Vivi2g02789 285 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 21 202 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02789 126 198 C2H2 Transcription Factor Family AT4G35280 42.500 6.89e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vivi2g02789 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02789 - - vvo:131646726 484.567