Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02781 ATGGATTCCTCGCTCACTAACCTCCTTCTCTTCAACAACACCGTTCAACCAGAGTTGATGAGAAGCGTGCATGTGTACCGCGGTGAATGTGACGGAGAAGAAACGGAAGTTGAACGAGAGTTTGTGTTTTCTGAAACTGCTCCCTATGTTGAAATGCAAGCTACTCCGATTTTCACATTGTTGAAATCTTTTGCGTGTCGAGAAGTTTCTCAAGGGGATAAGAATGGAGTTTGGCTTTGTGTTTTTGCTTTTCACGCTTGTAATTCGCCTCAATTTTCTCACATTCCATCTCTTTTGTTGGTTGCAAGAAATCCAAAGCTTCATGCTATTCCAAACTTGCTTAATGATCTCCAAAGGATATACAAGTTGAACCCAAAGGAGGAACACAGTGAACTACAAGACGACTCTACAATGGACGAATCGAAGGGAAACAACAATGAATACCAGCCAGCGAAAAAAGTCTCACTGGTGTTTGAACAAGATCTCAATTACCTTCCTTACGAAAAAGATGAGTCTGAGTTACTTGATGACGGGACAGATTTTGAAAGTTCTTCAGGTTTTGTAGGAAAGAAAAAGAGGGCACCAAGTTACCATGTAGCAAAAATTACTTTATCAGATTTAGTCAAGTACTTTGATATGCCAATTGCAGAAGCGTCAAAAAAACTAAATGTTGGCCTTACTGTTCTCAAAAAAAAGTGCAGAGAATTTGGTATTCCTCGCTGGCCTCATAGGAAGATCAAATCACTTGAGAGCCTCATTCAAAATCTTCAGGAGGAGGCAAAACATCAGGAAATGGAGGACAAAGCTGCAGCAATGGCAGCGTTAAGGAGGCAAAAGATGTTGGAAAGTGAAAAGGAAAACATAGAGAAGATGCCTTTCATGGATATACGAACTGAGACCAAGAGATTCAGACAAGATATTTTCAAGAGAAGACACAGAGCTAGAGTGATTGAAAAACAGAATTCCGCAGTAGCAAGTACTTAG 984 0.4035 MDSSLTNLLLFNNTVQPELMRSVHVYRGECDGEETEVEREFVFSETAPYVEMQATPIFTLLKSFACREVSQGDKNGVWLCVFAFHACNSPQFSHIPSLLLVARNPKLHAIPNLLNDLQRIYKLNPKEEHSELQDDSTMDESKGNNNEYQPAKKVSLVFEQDLNYLPYEKDESELLDDGTDFESSSGFVGKKKRAPSYHVAKITLSDLVKYFDMPIAEASKKLNVGLTVLKKKCREFGIPRWPHRKIKSLESLIQNLQEEAKHQEMEDKAAAMAALRRQKMLESEKENIEKMPFMDIRTETKRFRQDIFKRRHRARVIEKQNSAVAST 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02781 327 Pfam RWP-RK domain 201 249 IPR003035 -
Vivi2g02781 327 ProSiteProfiles RWP-RK domain profile. 184 269 IPR003035 -
Vivi2g02781 327 Coils Coil 246 266 - -
Vivi2g02781 327 PANTHER PROTEIN RKD4 83 316 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02781 Vivi-Chr2 123373027 123376464 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02781 15 327 AtRKD Transcription Factor Family AT4G35590 47.720 6.03e-87 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Vivi2g02781 RWP-RK 1.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02781 - - gmx:100306328 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02781 2 123373027 123376464 Vivi2g02781 2 123373027 123376464 ECH