Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02767 ATGGGAGGCTTATTGCCTTTTTTTGAATTCAGTCAAGGGAGGATGGCCAAGAAAGTTCATGCTCACAAGAGACATCATGTTGACTTCGAAACTCCTCGAAATAGTTTAGATCTGCAAGAAGAAACATCTCGGAAATACGGTCCACGAGGAGAATTACCGCACTATTATCAAGTAGAAGAAGATTGGCCTGAAAATAATGGTTACTCAAACACGGGTTCGATGAAAAAGCTGATCAATGAAGAGCTATCGGTGCGATCAAGCACAAGGCAAAATGCACCAAGCATTGTGGCAAGGTTGATGGGGTTAGACATGATGCCGGTAGAGACTAAATCTGCTGTTCCATCGGATAAAAGAATAAGTGAAAATACAGCGAAGAAGTATTCGAACAAGAGAATGAATGGTTCCAACTTTAATTCTTCTAGCCATATTGAACTTGATTCGGTTTATGAAATCATAGATGACGATGATGATGGATGGAGCCGGAGTTTTGGAGAACCAAGGCCACGGGAACATCCACAGGAAGAGGAACTTCAGAAATTCAAGAAAGAGTTTGAAGCATATCAAGCAGCAAGGTTTCAAGAATGTTCGAGGTTTGCTGAAATCGGCAGTGTTTCTAGCCGATTGATTTTTCAAGAGAATCTGAATAAGGAAAAGGTTGCACATAATACAAACATGCAAAGGAAAGTATTTCCTTCAAATAGCAGAACTCTAAGTAGAGACTTTGAAGAGTCCTTAATGATAAAATCTTATAACAGATTAGGGGCATCTTCTCCGACTCGAATAGTTATCTTGAAGCCCGGTCCTGATAGTATCTTCAGTCATGAAGAGAATTGGACCAGTGCATCAGGAGCTTTACCAGGGAGACATAGTATAGAAGATTTTCTTGAGGAGGTGAAAGAGCGTCTGAAATGCGAACTCCAAGGAAAAAATGTTGCAAAAGGTTATGCTGTTCGAGGAAGTGAAATTGAGGCCCTGCGCAATAAAAAACCATCCGATCCTAAACTCATTGCTCGTCAAATAGTAAAGCAGGTAAAAGAAAATGTGAATAGAGATTCTGACTCAAATTCAGGCTGCTCAGAATCAACAAGATCATACAAAGGTGAAGAGAAGTTCAAAAGACCGAATTATCCGGAATTTATCAGTAATACAAGGAGTTACTTGTCAGAGAAGCTAACAAACACGGTAACAAGTGAAGGACGCGATGATGATATTTATGAAGTGAAGTCAAGATCACATGCATTTGACAATCCAAGAGTTAGACTCAAGAAAACGGAAGGTCTTTTGCATTGTGCAAATGAATGGGAAATATCGAAAGAGGAAACGGAAATACAAACGGGATCCTTTAGGCACGAACAAGACAGCGACATTATGCTTCACAAGGAGTTCTTGTCTCCAAGGAACCTTGTAAGATCATTGTCTGCTCCTGTATCAAGATCAGGAACATCATTTGGAAAGCTTCTTCTAGAGGACCGACACATTTTAACTGGCGCTCATATTCGCAGAAAGCTTGAAGCTGTCGAAACTATGTCTGTTGATGTTAAAAAACCGAAAAAAGAGAGGTTTAATCATATTAAAGAAAGGGTCTCCAATTTTAGATACAGTTTTGCACTAAGAGGGAGGCTTTTCGGCAAGAGGAATCAATCAATGGGCGAATCACACAGAAATGAATATCGTCCAGCAACAAGAGATATCACAAGTGGCCCAACAGTGCTTATGAACTGTGGAAGCGAAAGACATGAGAACTACACTGAGGTACCTCCTAGTCCTGCATCTGTATGCAGTAGTGTTCATGAAGACTTTTGGAGGCGAACCGAATATTTAAGTCCAATATCAACTCCTGATGTGTCATCAAGAGATGATACTGTTATGCCTCAAGTTTTCAGAGATATCAGCTCAGGTTTAAATGAGTTAAGAAGACAACTCAATCAACTTGATTCTGATGATGTTGATGTTGAGGATTTCTCTATGAAACATAAACCTACTGAGACTGAGTTGATGCAATTAAACGATCCAGCAGAATCTTACATAAGAGATTTACTTCTAGCATCTGGTCTATACTTCGGTTCTTGGGACAAATCTTTGTTAAGAGGGGACACATATGCAAAGCCTATTGGAAATTCCGTTTTTGAAGAAGTTGAAGAATCTCATAAGAACTTAATCAATGAGAATGATGCAAATTTTACAAAGGATCAAAGCGAGAATAGCCACAAGATTTTGCTCGATTTGTTAAACGAGGCACTTTCCGTTGTTCTTGGACCGCCTTCCACATTGTCTAGATTCAGAAAGAAATTATGCAAGTCTTCCATGTTGCCGCCGCCTCAAGGAAAGGAACTATTGAAGTTAGTATGGGAAAATATCCGCGTTTTGTTATATCCTTCATCTGATATATCTCATTATTCAGTTGATACTTTGGTTGCTCAACACTTGAGTTCAATTCCTTGGTCTGGAATAATCAATGATGAGATAAATATATTAGGAAGAGAGGTAGAATGTCTTATAACTAATGATCTTGTTGAAGAACTCACAAAGGATTTGATTTGA 2541 0.3912 MGGLLPFFEFSQGRMAKKVHAHKRHHVDFETPRNSLDLQEETSRKYGPRGELPHYYQVEEDWPENNGYSNTGSMKKLINEELSVRSSTRQNAPSIVARLMGLDMMPVETKSAVPSDKRISENTAKKYSNKRMNGSNFNSSSHIELDSVYEIIDDDDDGWSRSFGEPRPREHPQEEELQKFKKEFEAYQAARFQECSRFAEIGSVSSRLIFQENLNKEKVAHNTNMQRKVFPSNSRTLSRDFEESLMIKSYNRLGASSPTRIVILKPGPDSIFSHEENWTSASGALPGRHSIEDFLEEVKERLKCELQGKNVAKGYAVRGSEIEALRNKKPSDPKLIARQIVKQVKENVNRDSDSNSGCSESTRSYKGEEKFKRPNYPEFISNTRSYLSEKLTNTVTSEGRDDDIYEVKSRSHAFDNPRVRLKKTEGLLHCANEWEISKEETEIQTGSFRHEQDSDIMLHKEFLSPRNLVRSLSAPVSRSGTSFGKLLLEDRHILTGAHIRRKLEAVETMSVDVKKPKKERFNHIKERVSNFRYSFALRGRLFGKRNQSMGESHRNEYRPATRDITSGPTVLMNCGSERHENYTEVPPSPASVCSSVHEDFWRRTEYLSPISTPDVSSRDDTVMPQVFRDISSGLNELRRQLNQLDSDDVDVEDFSMKHKPTETELMQLNDPAESYIRDLLLASGLYFGSWDKSLLRGDTYAKPIGNSVFEEVEESHKNLINENDANFTKDQSENSHKILLDLLNEALSVVLGPPSTLSRFRKKLCKSSMLPPPQGKELLKLVWENIRVLLYPSSDISHYSVDTLVAQHLSSIPWSGIINDEINILGREVECLITNDLVEELTKDLI 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02767 846 MobiDBLite consensus disorder prediction 548 568 - -
Vivi2g02767 846 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 226 845 - -
Vivi2g02767 846 MobiDBLite consensus disorder prediction 347 368 - -
Vivi2g02767 846 MobiDBLite consensus disorder prediction 30 50 - -
Vivi2g02767 846 Pfam DUF761-associated sequence motif 90 106 IPR032795 -
Vivi2g02767 846 Pfam Domain of unknown function (DUF4378) 674 840 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02767 Vivi-Chr2 122845398 122849573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02767 74 845 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 41.771 5.30e-143 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02767 - - gmx:100789616 1115.91