Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02760 ATGTCGTGTTCGTCTTCATCGGGATCGGAAGATGATAACGAAGGGTTTGAGTCTTACCGGAAAGGTGGTTACCATGCCGTTAGAATCGCCGATTCTTTCGCGGCTGGGAGGTTTATAGCTCAGCGGAAACTTGGTTGGGGTCAATTCTCCACCGTCTGGCTCGCTTATGATACTATCACCTCTTCATATGTGGCTCTCAAAATCCAGAAAAGTGCGGCCGATTTTGTTCAGGCTGCCCTCCATGAGATTGATGTTCTTTCATCCATTGCGGAAGGTGATCCATCAAATTCAAAGTATGTTATCCAATTGATTGATCACTTTAAGCATACAGGTCCCAATGGGCAGCATCATTGCATGGTCCTTGAGTTTCTCGGCGATAGCTTGCTTCGTTTGATCAGATATAACCGATACAAAGGTCTTCCACTGAATAAAGTTAGAGAGATATGTAAATGCATTTTGATTGGTTTGGATTATTTGCATAGTGAACTCCGTATAATCCATACTGACTTAAAACCTGAAAACATTCTTCTATTTTCAACTATTGACCCTGCCAAAGATCCTTTTAGTTCTGGTTGCTCCCCAATTTTAGAACGGCCTGTGGGAAACACAAACGGTGGACTTACTAGTCTTATTGAGAAAAGGTTGAAGAGGAGAGCGAGGAGTGCAGTTGCTAAAATATCAGGAAGAACGGCTTCAATTGAAGGAAGAGGAGAAGCTGCAAAATCTCGTAGAAATATTGATGCAATTGACGTGAGATGCAAGATTGTCGATTTTGGAAATGCGTGTTGGGATGATAAGAAGTTTGCAGAAGAAATACAAACAAGGCAGTATAGAGCCCCTGAAGTTATACTGAAGTCTGGTTATTCGTTCCCTGTTGACATGTGGTCTTTTGCTTGCATTGCTTTTGAGCTTGCCACTGGAGATATGTTATTTACACCCAAAGGTGGACAAGATTATAGCGAGGATGAGGATCATCTTGCCCTGATGATGGAACTCCTAGGAAAGATGCCGCGGAAGATTGCTATTGCCGGAGCACAATCCAAGGATTACTTTGACAGGCACGGTGATCTGAAAAGGATTCGAAGGCTAAAATATTGGCCACTTGACAAATTACTAATCGATAGATATAAATTTTCAGCGAATGACGCACGTGAGTTTTCAGAGTTTCTTTTGCCACTTTTTGATTTTGCGCCAGAAAAACGACCAACTGCACGACAGTGCATGCAACATTCCTGGCTGAACTGCAAGGAGTCAGCATCAAATGAAACGAGAAACGAAACTACTGTCGAAAAGGTTAATGTTGGTATGAGCAATCTTCAAATCAAGGTAGGAAAGTGA 1338 0.423 MSCSSSSGSEDDNEGFESYRKGGYHAVRIADSFAAGRFIAQRKLGWGQFSTVWLAYDTITSSYVALKIQKSAADFVQAALHEIDVLSSIAEGDPSNSKYVIQLIDHFKHTGPNGQHHCMVLEFLGDSLLRLIRYNRYKGLPLNKVREICKCILIGLDYLHSELRIIHTDLKPENILLFSTIDPAKDPFSSGCSPILERPVGNTNGGLTSLIEKRLKRRARSAVAKISGRTASIEGRGEAAKSRRNIDAIDVRCKIVDFGNACWDDKKFAEEIQTRQYRAPEVILKSGYSFPVDMWSFACIAFELATGDMLFTPKGGQDYSEDEDHLALMMELLGKMPRKIAIAGAQSKDYFDRHGDLKRIRRLKYWPLDKLLIDRYKFSANDAREFSEFLLPLFDFAPEKRPTARQCMQHSWLNCKESASNETRNETTVEKVNVGMSNLQIKVGK 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02760 445 FunFam Protein kinase superfamily protein 24 123 - -
Vivi2g02760 445 FunFam Serine/threonine-protein kinase SRPK 115 413 - -
Vivi2g02760 445 SUPERFAMILY Protein kinase-like (PK-like) 33 415 IPR011009 -
Vivi2g02760 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Vivi2g02760 445 CDD STKc_SRPK 27 413 - -
Vivi2g02760 445 Gene3D Transferase(Phosphotransferase) domain 1 92 413 - -
Vivi2g02760 445 ProSiteProfiles Protein kinase domain profile. 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02760 445 Pfam Protein kinase domain 252 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02760 445 Pfam Protein kinase domain 40 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02760 445 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Vivi2g02760 445 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 225 426 - -
Vivi2g02760 445 SMART serkin_6 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02760 445 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02760 Vivi-Chr2 122815208 122818326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02760 1 441 EF-hand Containing Proteins AT5G22840 47.461 3.80e-165 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Vivi2g02760 Pkinase 8.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02760 K08832 - gmx:100784192 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02760 2 122815208 122818326 Vivi2g02760 2 122815208 122818326 ECH