Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02755 ATGTTGCTGTCTTTATGGCTATTTTTATATAGGCAACTCATTATTCATCCCACAATGGTTAAAGTTTGGTTATTGGCTCTAATGATTCTCTACAATGGCTTCTCTTTAAGTGTGTTTGGTATTCATAATTCAACAAGACCTGAATTTGTACATATTGGAGCTCTCTTCTCTTTCAATACTAGTGTTGGTAAGATTATCAAAATCGCGATTGAATCGGCTGTTGAAGATGTAAATTCAGATCCAAATATTCTCGGCGAGACCAAGTTGAAGCTCTCTCTTCAAGAAGATTCTAAATATAGAGGCTTTCTTAGCATTGCTGAGGTTTTGCAGGTCATGGCTAGACACAATGTGGCAATAATTGGTCCTCATAGTTCTGTAACAGCTCATGTCATAACTCATATTGCGAACGAGCTTCAAGTTCCTCTTCTCTCATTTTCAGCTTTAGACCCTACGCTTTCTTCGCTTCAATTTCCATTCTTTATTAGAACATGTCACAGTGATCTTTTTCAAATGGCGGCAATAGCAGACCTTGTTGATTACTATGGATGGAAAGAAGTCATTGCTGTGTATATAGATGATGACAATGGAAGGAACGGAATCGTTGCATTAGGCGATAAGCTTGCTGAGAGACGCTGCAGGATCTCATATAAAGCACCTGTGAGCCCCGAAGCAACTCCGGAGGAGATTACGAATGTGCTTGTTCAGGTGGCTCTTGCAGAATCAAGAATTATTGTTGTTCATGCTAACACTCTTTGGGGTCCGAAAGTGTTTAGTGTTGCAAAGAATCTTGGAATGATGGGAACTGGTTATGTATGGATAGCCACTGCTTTTCTTTCAGCTATTCTTGATATAAGTAGTCCTTTATCTTCTGATAAAATGGATGAAATCCAAGGAGTGTTGACAACGCGCGTGTACACGCCGGATTCGGAGCTTAAAAGAAGGTTTGCTTCGAAATGGAAAAACTTGACTCGCGGAAATACTGCTAATGGCCCTCTTGGACTTAGTTTTTTGTCTCTCTATGCATATGATACTATTTATGCTCTTGCTCATGCACTTGATGCATTTTTCAAGCAAGGGAACAAAATCACCTTCACAAATGATTCAAAACTACTTTCACTGCATGGTGACAGCTTGAATCTCGAAGCGTTGAACGTCTTCAATGAAGGAAACTTGTTACGTAAAAACTTTTATGGGGTTAACATGACAGGTGTGACAGGCTTGTTCAAATATGCACCTGATGGAAACCTTGTTAATCCCGCATATGAAATCATCAATGTGATTGGAACCGGGTCACGGAGGATTGGTTATTGGTCTAATCATTCTGGATTATCGGCCGTTCCTCCAGAAACAAATCATTCCAAACCGGGCAACGATTTCAGGGAAAGCAAAAAGCTACTCCCTGTGATTTGGCCTGGCGACATATACCAGAAGCCTCGCGGTTGGGTTTTTCCGAACAACGGAAGGCTATTAAGAATTGGAGTACCGAAACGCGTTAGTTACCGCCAATTTTTGTCACAAGTACCAGGCACTGATACATTTCAAGGATTCTGCATTGATGTGTTTCTCTCTGCAGTTAACCTCTTGCCTTATGCTGTCCCTTATAAGTTCATTCCATATGGGGATGGCAAGACCAATCCTAGCAACACCGAGCTTGTCCGTTTAATAACAACCGGTGAATTCGACGGTGCCGTAGGTGACATTGCAATTACCACAGAAAGAACAAAAATGGTGGATTTTACTCAGCCATACGTCGAGTCTGGTTTAGTGGTAGTAGCACCTGTTAGGGGGTCTGAAACAAGTGCTTTGGCCTTTTTGGCTCCATTTACACCAAGAATGTGGTTTGTCACTGCATTGTTTTTCATAATAGTTGGAACTGTTGTTTGGATTTTGGAGCATAGGGTGAATGATGAATTTAGAGGACCACCCAGAAAACAATTGATTACTATTTGTTGGTTTAGCTTTTCAACAATGTTCTTTTCACATAGGGAAAATACAGTGAGCACGCTCGGTCGTTGCGTGCTACTTATATGGTTATTTGTAGTTCTCATAATTACTTCAAGTTACACAGCAAGTCTAACATCAATCCTCACTGTACAACAACTTTCTTCACCAATTAAGGGCATTGAAAGTTTAGTAAATATGAAAGAACCAATTGGTTACAGTCAAGGCTCATTTGCTAAAGATTATTTAATCCAAGAAATCGGTATTGATGAGTCTAGGCTTGTTCCTTTAACAACACCAGAACAAGTTACTAGAGCACTGACAAAAGGTCCTCAAGATGGTGGTGTTGCTGCTTATATCGATCAACGTGCCTATATCGATATATTCCTTTCAAGCCGATGTCAGTTTACTGTTGTAGGTCAAGAGTTCACCCGAAACGGTTGGGGATTTGCCTTTCCAAGAGACTCGCCATTAGCAGTTGACCTATCAACCGCCATTTTGCAAATGGTAGACAATGGAGACTTACAAAGAATCCATGACAAGTGGCTTTTGAGTAGAGCTTGTTTAACACAAGGTGCAAAGCTTGAAGTTGAAAGGCTCAAGCTAAAAAGCTTTTGGGGCCTCTATGTAATATGTGGATCAGCTTGTTTGCTTGCTCTACTCATATATTTCATACAGATAATAAGACAGTACTACAAGCACCACTCAGAAGAACATCATGATTCTCCTGACCAAAACTCTGGCTCGGGATCGACGTGTTTGAAGAGTTTCCTCACCTTTGTAGATGAAAAAGAAGAGACTGTTAAAAACCGTTCGAAGAGAAAGAAAATGGAGAGAATCTCGTATAGAAGTAGTGAGGGAGGATCAATCTCCATCAATTCTAATAAAGATTATGTTGCTCAGTCTTCTTCATGCATAGCTGATTCTGTTTCTAATGGTGGAAGTGAACAAGTATTTATCAAAGTAGTGTAA 2913 0.4027 MLLSLWLFLYRQLIIHPTMVKVWLLALMILYNGFSLSVFGIHNSTRPEFVHIGALFSFNTSVGKIIKIAIESAVEDVNSDPNILGETKLKLSLQEDSKYRGFLSIAEVLQVMARHNVAIIGPHSSVTAHVITHIANELQVPLLSFSALDPTLSSLQFPFFIRTCHSDLFQMAAIADLVDYYGWKEVIAVYIDDDNGRNGIVALGDKLAERRCRISYKAPVSPEATPEEITNVLVQVALAESRIIVVHANTLWGPKVFSVAKNLGMMGTGYVWIATAFLSAILDISSPLSSDKMDEIQGVLTTRVYTPDSELKRRFASKWKNLTRGNTANGPLGLSFLSLYAYDTIYALAHALDAFFKQGNKITFTNDSKLLSLHGDSLNLEALNVFNEGNLLRKNFYGVNMTGVTGLFKYAPDGNLVNPAYEIINVIGTGSRRIGYWSNHSGLSAVPPETNHSKPGNDFRESKKLLPVIWPGDIYQKPRGWVFPNNGRLLRIGVPKRVSYRQFLSQVPGTDTFQGFCIDVFLSAVNLLPYAVPYKFIPYGDGKTNPSNTELVRLITTGEFDGAVGDIAITTERTKMVDFTQPYVESGLVVVAPVRGSETSALAFLAPFTPRMWFVTALFFIIVGTVVWILEHRVNDEFRGPPRKQLITICWFSFSTMFFSHRENTVSTLGRCVLLIWLFVVLIITSSYTASLTSILTVQQLSSPIKGIESLVNMKEPIGYSQGSFAKDYLIQEIGIDESRLVPLTTPEQVTRALTKGPQDGGVAAYIDQRAYIDIFLSSRCQFTVVGQEFTRNGWGFAFPRDSPLAVDLSTAILQMVDNGDLQRIHDKWLLSRACLTQGAKLEVERLKLKSFWGLYVICGSACLLALLIYFIQIIRQYYKHHSEEHHDSPDQNSGSGSTCLKSFLTFVDEKEETVKNRSKRKKMERISYRSSEGGSISINSNKDYVAQSSSCIADSVSNGGSEQVFIKVV 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02755 970 FunFam Glutamate receptor 485 601 - -
Vivi2g02755 970 Pfam Bacterial extracellular solute-binding proteins, family 3 534 830 IPR001638 -
Vivi2g02755 970 Gene3D - 485 601 - -
Vivi2g02755 970 SMART GluR_14 491 832 IPR001320 GO:0015276|GO:0016020
Vivi2g02755 970 FunFam Glutamate receptor 601 731 - -
Vivi2g02755 970 SUPERFAMILY Periplasmic binding protein-like I 45 482 IPR028082 -
Vivi2g02755 970 FunFam Glutamate receptor 727 834 - -
Vivi2g02755 970 PIRSF IGluLR_plant 18 956 IPR017103 -
Vivi2g02755 970 Gene3D - 68 418 - -
Vivi2g02755 970 FunFam Glutamate receptor 166 323 - -
Vivi2g02755 970 Gene3D - 776 837 - -
Vivi2g02755 970 Pfam Receptor family ligand binding region 68 428 IPR001828 -
Vivi2g02755 970 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 50 892 IPR015683 -
Vivi2g02755 970 Gene3D - 602 728 - -
Vivi2g02755 970 CDD PBP1_GABAb_receptor_plant 51 447 IPR044440 -
Vivi2g02755 970 Pfam Ligand-gated ion channel 831 862 IPR001320 GO:0015276|GO:0016020
Vivi2g02755 970 Gene3D - 166 443 - -
Vivi2g02755 970 CDD GluR_Plant 490 830 - -
Vivi2g02755 970 SUPERFAMILY Periplasmic binding protein-like II 465 832 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02755 Vivi-Chr2 122754716 122758379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02755 23 932 Ion Channels AT3G51480 58.068 0.0 1096
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02755 K05387 - gmx:100793320 1510.35