Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02751 ATGGAATGTTCAAAAAAGCGACCAAGAAATTTTGATAAGGATTATGAAACCTCTATTTCTAGCAGTGTTGGAAAATCTATTATAACTACAACATCAACATTAACATCAAAGAAAAGTGAGAAATATGTTACTCAATCTAAGAAGAATTCGGAGGGTGGTCGTGCAAGGGAGAGGTCTACACTTGTTTCTTGGTTGATAAGGAATCGAGTTTTATCTCCGGGGACTAAAGTGACTTGTCGTGGAAGAAATAATATTGTCAAGAGAGGGCGTTTATCTTATGACGGTATAGTTTGCGATTGTTGTAATGTTATTTTTCCTATCACTAAATTTGAGGCTCATGCGGATTGTACAAGACATAGACCATCCACTAGTATTTTGTTGGACGATGGAAGATCGTTGTTAAAATGTCAAAAGGATGCTTTGAGTTTGCGTGATCAGCGTGATCAAAATAAAAATCATTTTGTTGTCGAAGAGAATGTTGAAGCAAATAACGATAGTGTTTGTTTAGTTTGTGGTCTTGGAGGTGATATAATTCTATGTGATCGATGTCCTTCTTCATTTCACATTAGTTGTTTAGGACTCGATCATGTTCCTGAGGATGATTGGTTTTGTTCAACCTGTTGTTGCAAAGTATGTCGCCGACCCAAATGCAAACAAGAGTGTAAAGATCACATGGATAATAATGTTCTTGTTTGTGCTCAATGTGCGCAAAGGTATCACTTTGGATGTTTAAAGTTTATAGACTTTGGATTATGGTATGTGGAGAGTAATAAGAAAAAGAAGGATTGGTTTTGCAGTTTAGTTTGTGGAAACATATTCTTAGACCTGATGAAGTTGTTAGGGAAACCAATTGAGGTTGCAGATAACATAACTTGGACATTAGTGAAAAATGTGAGTAGTGATATAGATGATGATAATGGAGATATTGGTGGAGGTTTTACTTCTAATAAGTTGATTGCGGCCCTTAGTTTATTGTATGAAAGTTTTAATCCAACTATCGATGTTTTATCAGGAAGAGACTTGATTAAAGATTTGATATTTAGCAGAGAATCAAAAAACAATCGCTTGAATTTTTCTGGGTTCTTTACTGTCATTTTAGAGATAAATTGCGAGGTGATTACGGTGGCAACTATAAGGATTTATGGGCAAAATGTTGCGGAGATAGTTTTCGTGGCCACCAAAGAACAATATCGAGGACGAGGAATGTGTCGATTGTTACTGAATGAGCTCGAGAAACAATTGATTGTCTTAGGTGTTGGGAGCTTGATTCTGCACTCCTCTGAGGATGCAATAAATACTTGGACAAAATCGTTTGGTTTTGTTAGAATAACTCCTAGAGAGAAGCGTCAGTTTATTGATTACACTTTTTTAGAATTTGAGAACACTATCATGTGTCTTAAATCTTTGAAATGA 1413 0.3567 MECSKKRPRNFDKDYETSISSSVGKSIITTTSTLTSKKSEKYVTQSKKNSEGGRARERSTLVSWLIRNRVLSPGTKVTCRGRNNIVKRGRLSYDGIVCDCCNVIFPITKFEAHADCTRHRPSTSILLDDGRSLLKCQKDALSLRDQRDQNKNHFVVEENVEANNDSVCLVCGLGGDIILCDRCPSSFHISCLGLDHVPEDDWFCSTCCCKVCRRPKCKQECKDHMDNNVLVCAQCAQRYHFGCLKFIDFGLWYVESNKKKKDWFCSLVCGNIFLDLMKLLGKPIEVADNITWTLVKNVSSDIDDDNGDIGGGFTSNKLIAALSLLYESFNPTIDVLSGRDLIKDLIFSRESKNNRLNFSGFFTVILEINCEVITVATIRIYGQNVAEIVFVATKEQYRGRGMCRLLLNELEKQLIVLGVGSLILHSSEDAINTWTKSFGFVRITPREKRQFIDYTFLEFENTIMCLKSLK 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02751 470 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 227 IPR013083 -
Vivi2g02751 470 ProSiteProfiles Zinc finger PHD-type profile. 165 210 IPR019787 -
Vivi2g02751 470 Pfam PHD-finger 168 209 IPR019787 -
Vivi2g02751 470 PANTHER PHD FINGER PROTEIN 12 33 469 IPR042163 GO:0003714|GO:0045892
Vivi2g02751 470 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 348 447 IPR016181 -
Vivi2g02751 470 Gene3D - 316 457 - -
Vivi2g02751 470 Pfam Acetyltransferase (GNAT) family 355 440 IPR000182 GO:0016747
Vivi2g02751 470 SMART PHD_3 209 269 IPR001965 -
Vivi2g02751 470 SMART PHD_3 167 208 IPR001965 -
Vivi2g02751 470 CDD NAT_SF 364 425 - -
Vivi2g02751 470 Pfam Tify domain binding domain 89 139 IPR032308 -
Vivi2g02751 470 SUPERFAMILY FYVE/PHD zinc finger 157 210 IPR011011 -
Vivi2g02751 470 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 324 464 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02751 Vivi-Chr2 122744881 122746293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02751 25 417 PHD Transcription Factor Family AT5G58610 38.958 5.67e-84 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Vivi2g02751 Acetyltransf_1 5.1e-08 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02751 - - vvo:131649911 939.873