Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02750 ATGAAGCTTCGCGTTTCAATTTTCTTCTCTCTATTCTTCTTCTTCATCTTCCTCATCTCCACCTCCATCGCCGATGATTCCATCTCCCAATCCCAACAACTCTCCCTCCTCCGCAACGGAAACGAATTATCTCCTTCCGCCCTCGTTCTTCCACCATCACCAAAACCTGATACGGCACTAGTTGCTGCCCTAGACGGTACTGTTTATCTCGTTGAAAGTGCTTCCGGGAGGGTAATTTGGTCTTTTTCAACTGGATCCTCAATCTACCATTCTTCCGCCAACACTCCTTCTTCTGAACACGTCGAATGTGGTGATGACTGGGAATTAATCTTTCACGATACTCACTTTGGCAAAACGAGGCTCAAGGAATCTGTTGCTGATTATGTTGCTGTTACACCTATTGTGTCTAAAGATGGAGCTGTTATACTTGGATCCAAAAGGAGCACTGTATTTGAAGTTGATGCAAAAACTGGAAAGCTCCTTAGAAGTTATGGTGCTGCTGATTTTCATAATGCTTCTACTACTGCAGTGTGGAGTGGTGACAAGGACAGGCAAAAAGTTAGTACTTTTGTCGGTGCAAATAATACCGAACTTGCTGATCCAGGAAAGCTTGATTTACCGGAGTTCTTGCTCCAGATAGTTAGGACCGATTATTTTTTACAATCTGTGGGTCCTGGTTCAGGAATAGTGTTGTGGACTATGTCAGTAGCTGAATTTGAGGCTGTATTATTTTGCAAACATAATGAAAATCCTACCTTCAAGGCTTCCCTTGATGCAGAAGGTGAGTATGCTTCTGATGTTGACAGTGGCTTGGATTTTGCTATGCCGTATGCGTGTCCAGACAGTAAGCTCAGAGAAGTCTATCGCCAGCGAAAGAGTTTTCTGTTTGAACCTGCTAACTTCGAAAGATTATCTGATGTTAGTTCTTTTCAAGAACATGATATCCTCCCGATGCCGGTTTCACATCTGATGCTTCCATCACAACCTAAGAGTGAAAAATTCCTCCCCGGTCACAATGGTAATATGATGCTTCCCGGGCCTGTGCCTAATTCTTTGCAGCCAAAAATTAGCTTCTACGATAGTAATGATGATAATGCAGTTGTGCTCCCTCAGCCGCATATGGAGATTGCTGCACCTAGGGAAATTGATCTGAACAGGGTGATTGAATTGTCAATGACATTATTGGCTGTATTATCTGTGGTGTTTCTTTTGATATTTTACCAAAATCGATCTACAAATAAAGCAAAGGTTCAAATCAGTGGCACAGATTTGAAAAGCCCACCTTCTAAGAAAAAGAGAGCACGCAAGTCAGGAAAAAACAATGTCATTGTTGAAAAACAGGATAATCATCTCTATTCAGTTGAGGAGAATATACGAATATATAAGGAAGCAGAAAATGAAGCACGTTTGCTGTATAATAAAGTCAATGGACGCAGGATTGGTAAACTGCATGTATCTAATAAAGAAATTGCGAAGGGGAGTAATGGTACTATTGTTCTTGAGGGGATTTATGAAGGTCGATCAGTTGCTATCAAACGTCTTGTTCAGGCTCATCATGATGTAGCTCATAAAGAAATCCAAAATCTCATTGCTTCTGACTTTCATCCAAATATTGTCCGATGGTACGGCGTGGAATATGATCAAGATTTTGTTTACCTTGCTCTAGAACGTTGTGCATGCAACTTGGATGATTTGATTACTATTTATTCAGATATGTCAGAAAATCCAGTGCTAAACAAAGATCGAGCTTTTGAATTTTTCAAGAAGACCCAGATAGAGACGCAGGGAGATGATACACAGAGTCTTTGGAAAACAAATGGTTATCCATCTCCTCTTTTACTAAAGCTGATGAGGGATGTGGTCTCTGGGCTTGTTCATTTGCACGAACTAGGAATAATACATCGCGATTTGAAACCCCAAAATGTTTTGATAAACAAGGAAAGATTATTATGTGCCAAGCTTTCTGATATGGGGATTAGCAAGCGACTTCTTGAAGATATGTCTTCATTAGGCCATAGTTCTACTGGATGTGGCAGTTCGGGTTGGCAAGCACCAGAGCAGCTTCTTCAGGGACGTCAAACACGGGCTGTGGATTTGTTTAGTTTAGGCTGTGTCCTCTTTTTCTGTATGACAGCAGGTAGACATCCATTTGGAGAACGTCTTGAGCGTGATGTCAATATTGTTAACAATAAAAAGGATCTTTTCTTAGTGGAGTTCCTTCCTGAAGCTGAGGATCTTGTTTCTTGTTTATTAAACCATGAACCCTATCTAAGGCCAAAGGCGATTGAAGTATTGCATCATCCTCTATTTTGGAATTCTGAGATGAGACTTTCATTTCTTCGTGACGTTAGTGACAGGGTGGAACTTGAAGATAGAGAGACTAATTCTGTTCTTTTAGATGAATTAGAGAGCACAGCTCCAATGGCTTTAGGTACAAAATGGGACGAAAAGATGGAACCGAATTTCCTTGCTAACATTGGTCGTTACAGGCGGTATAAATTTGATAGTGTTCGAGACTTGTTGAGGGTCTTGAGAAACAAGCTAAATCATTTTAGAGAATTGCCTCTAGAAATTCAGGAACTGATAGGACCTATTCCAGAAGGATTCAATGAGTACTTTACAAGTCGATTTCCAAGGCTTTTGATTGAAGTGTACAAAGTTATATGCAATAATTGCAAAGATGATGAATGTTTTCAAAGATATTTTAGAGACATTGATTAA 2721 0.4028 MKLRVSIFFSLFFFFIFLISTSIADDSISQSQQLSLLRNGNELSPSALVLPPSPKPDTALVAALDGTVYLVESASGRVIWSFSTGSSIYHSSANTPSSEHVECGDDWELIFHDTHFGKTRLKESVADYVAVTPIVSKDGAVILGSKRSTVFEVDAKTGKLLRSYGAADFHNASTTAVWSGDKDRQKVSTFVGANNTELADPGKLDLPEFLLQIVRTDYFLQSVGPGSGIVLWTMSVAEFEAVLFCKHNENPTFKASLDAEGEYASDVDSGLDFAMPYACPDSKLREVYRQRKSFLFEPANFERLSDVSSFQEHDILPMPVSHLMLPSQPKSEKFLPGHNGNMMLPGPVPNSLQPKISFYDSNDDNAVVLPQPHMEIAAPREIDLNRVIELSMTLLAVLSVVFLLIFYQNRSTNKAKVQISGTDLKSPPSKKKRARKSGKNNVIVEKQDNHLYSVEENIRIYKEAENEARLLYNKVNGRRIGKLHVSNKEIAKGSNGTIVLEGIYEGRSVAIKRLVQAHHDVAHKEIQNLIASDFHPNIVRWYGVEYDQDFVYLALERCACNLDDLITIYSDMSENPVLNKDRAFEFFKKTQIETQGDDTQSLWKTNGYPSPLLLKLMRDVVSGLVHLHELGIIHRDLKPQNVLINKERLLCAKLSDMGISKRLLEDMSSLGHSSTGCGSSGWQAPEQLLQGRQTRAVDLFSLGCVLFFCMTAGRHPFGERLERDVNIVNNKKDLFLVEFLPEAEDLVSCLLNHEPYLRPKAIEVLHHPLFWNSEMRLSFLRDVSDRVELEDRETNSVLLDELESTAPMALGTKWDEKMEPNFLANIGRYRRYKFDSVRDLLRVLRNKLNHFRELPLEIQELIGPIPEGFNEYFTSRFPRLLIEVYKVICNNCKDDECFQRYFRDID 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02750 906 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 774 906 - -
Vivi2g02750 906 ProSiteProfiles KEN domain profile. 773 904 IPR010513 GO:0004540|GO:0006397
Vivi2g02750 906 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 48 180 IPR011047 -
Vivi2g02750 906 Gene3D - 38 252 IPR015943 GO:0005515
Vivi2g02750 906 ProSiteProfiles Protein kinase domain profile. 484 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02750 906 Gene3D Phosphorylase Kinase; domain 1 471 556 - -
Vivi2g02750 906 SMART PGNneu 835 889 - -
Vivi2g02750 906 Gene3D Transferase(Phosphotransferase) domain 1 594 772 - -
Vivi2g02750 906 SUPERFAMILY Protein kinase-like (PK-like) 488 775 IPR011009 -
Vivi2g02750 906 SMART serkin_6 484 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02750 906 CDD RNase_Ire1 774 902 - -
Vivi2g02750 906 Pfam Ribonuclease 2-5A 776 902 IPR010513 GO:0004540|GO:0006397
Vivi2g02750 906 Gene3D KEN domain 773 905 IPR038357 -
Vivi2g02750 906 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 476 556 - -
Vivi2g02750 906 MobiDBLite consensus disorder prediction 418 440 - -
Vivi2g02750 906 SMART ire1_9 133 165 IPR018391 -
Vivi2g02750 906 SMART ire1_9 51 83 IPR018391 -
Vivi2g02750 906 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Vivi2g02750 906 PANTHER IRE1-RELATED 122 904 IPR045133 GO:0004521|GO:0004674|GO:0030968
Vivi2g02750 906 Pfam Protein kinase domain 487 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02750 906 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 594 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02750 Vivi-Chr2 122738368 122744811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02750 508 769 MAP Kinase Kinase Kinase AT3G06030 28.195 2.73e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Vivi2g02750 Pkinase 5.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02750 K08852 - gmx:100785363 1109.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02750 2 122738368 122744811 Vivi2g02750 2 122738368 122744811 ECH
Vivi2g02750 2 122738368 122744811 Vivi1g03257 1 70790982 70796117 PCT