Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02730 ATGGCGGCCATTGAAGGAAGAATCTCTGCGACCATTGAAGGAAGAATCCCCGCGGCGGTTGAAGGGAGAATTCCGGAAGAATTGACGGCTAGGTATTATGCCCTTTGCACCGTTGGAGGAATGCTCAGTGCTGGTACCACTCACCTTGTCACCACTCCTCTTGACGTGTTGAAAGTTAACATGCAGGTGCATCCTATTAAGTATCACAGTATTTCGTCTTGCTTTACTACGTTATTGAGGGAACAAGGGCCTTCTGTTCTCTGGAAAGGTTGGACAGGAAAGTTCTTTGGATACGGTGCTCAAGGAGGGTGTAGATTCGGTCTCTATGAATATTTCAAGGGGGTTTACTCCAATGTATTGGTAGACCAGCACAGGAGTCTCGTGTTCTTTCTTAGTAGTGCATCTGCCGAAGTATTTGCCAATTTAGCCTTATGCCCATTTGAAGCTGTTAAAGTCAGGGTTCAAGCACAACCTAGTTTTGCTAAGGGCATGTTAGACGGATTTCCGAAGGTATATGCATCAGAAGGCGCACGAGGATTCTACCGTGGACTTGCTCCACTTTTGGGTCGAAACATTCCATTTTCCATTGTTATGTTCTCAACGTTCGAGCATTCTGTTGATTTTTTGTATCGTAATGTTGTCAAAAGAAAAAAGGAGGAATGTTCAAAAGCTCAACAACTTGGTGTGACATGTTTAGCTGGATATACCGCTGGATCTGTTGGTAGCTTTATTTCTAATCCTGCTGACAATATAGTAGCTTCTCTTTATAACAAAAAAGCTGATAGTCTTATGCTGGCTATCAGAAAAATTGGACTAGCCAATTTATTTACCAGGAGCCTTCCTATTAGAATGTTGCTGGTTGGTCCTTCGATAACTATGCAATGGTTTTTCTACGATACAATCAAAGTTTTAGGTGGACTGCCAACTAGTGGTGAAGTTACAGCTGACTTAGGAGATGGGACAGGCTAG 969 0.4314 MAAIEGRISATIEGRIPAAVEGRIPEELTARYYALCTVGGMLSAGTTHLVTTPLDVLKVNMQVHPIKYHSISSCFTTLLREQGPSVLWKGWTGKFFGYGAQGGCRFGLYEYFKGVYSNVLVDQHRSLVFFLSSASAEVFANLALCPFEAVKVRVQAQPSFAKGMLDGFPKVYASEGARGFYRGLAPLLGRNIPFSIVMFSTFEHSVDFLYRNVVKRKKEECSKAQQLGVTCLAGYTAGSVGSFISNPADNIVASLYNKKADSLMLAIRKIGLANLFTRSLPIRMLLVGPSITMQWFFYDTIKVLGGLPTSGEVTADLGDGTG 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02730 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 304 IPR018108 -
Vivi2g02730 322 Gene3D Mitochondrial carrier domain 34 305 IPR023395 -
Vivi2g02730 322 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 24 314 IPR044677 GO:0005315|GO:1990547
Vivi2g02730 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 31 115 IPR018108 -
Vivi2g02730 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 208 IPR018108 -
Vivi2g02730 322 Pfam Mitochondrial carrier protein 37 117 IPR018108 -
Vivi2g02730 322 Pfam Mitochondrial carrier protein 130 212 IPR018108 -
Vivi2g02730 322 SUPERFAMILY Mitochondrial carrier 33 300 IPR023395 -
Vivi2g02730 322 FunFam Mitochondrial phosphate carrier protein 1, mitochondrial 34 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02730 Vivi-Chr2 122290418 122296621 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02730 20 313 Chloroplast and Mitochondria Gene Families AT2G17270 66.780 1.93e-154 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02730 K15102 - gmx:100788561 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02730 2 122290418 122296621 Vivi2g02730 2 122290418 122296621 ECH