Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02704 ATGCTTCCGATTCAGTGTCGCCGCCACCTCCACCACCACACGGCTTACCTCACCGCCGTCGTCGCCATTCTCTTCCTCCTCCCAGAAGTAACCTCCCAAGCTCAAATCCTCAAACGAGAATTTTACTCTTACGAAACCTTCAACGCCAGCAACCAACACTTTTTCGAAACTTTAGCCTCCGCAACCATCCACCTCGACGCCTTCCAGGTCACACCCGACAGCGCCGGAAGCACAACAATAGTCTCCATGAATAACAATTCCGGCAGAGTCTTTTTCAAAGATTCCTTCAAACTCTGGGAAGATTCATCCCCCACCGGAAAACTCGTTTCCTTCAACACCTCTTTCCTCATCAACATGTTACCTTACCTGAACCAAACTCCCGGGGAAGGTCTCGCTTTCCTCATCGCACCTTCCATCTCCATCCCTCTCAACAGCTACGGCGGCTATCTCGGTTTAACAAACGCCTCCACAGATGGTAATTCCACAAACCGTTTCATAGCCATTGAACTTGACACCGTTAAACAATCCTACGACCCTGACAACAACCACATGGGACTCAACATAAACAGCGTCCATTCCAACGTTACAGTTCCTCTCGATTTCGAAATCGCTCCAAAAGTTGCTAAGATATTTGCGTTATGGGTTGAATACGACGGTGACCGGAGAAACATTGATGTATATATAACAGAGCAACCTTCAAAGGATGCACCTATAGCAGAAAAACCGGTTAAGCCGATTTTATCTTCGGGTCTTGATCTAAAACAGATTTTGAGTCAGGACTCTTACTTTGGGTTTTCTGCTTCAACTGGAAATACTGTTGAGCTAAACTGTGTACTTAAATGGAACATTTCAATTGAAGTTTTCGATGAAAAAAACGACAAAGGGTTAACGATTGGATTAGGTGTTGGTGTTCCTGTTTTGGTTTTGATTTTACTAGGTGGTGGGTTCTGGTATTATTGTTATGTATATAAGAAAAAGAAAAATGATGAAAACGGTTCAAATTCTCAGATAATGGGAACATTGAAGAGTTTACCGGGAACTCCGAGAGAGTTTAGTTATAAGGAATTGAAGAAAGCTACAAATAATTTTGATGAGAAGAATAAACTCGGACAAGGTGGGTACGGTGTCGTTTACAGAGGAACATTGGTTAAGGATAATTTGGAGGTTGCTGTTAAAATGTTTTCTAGAGATAAAATGAAAAGCACTGATGATTTCTTGGCTGAACTTACTATCATCAATCGTCTTCGTCATAAACATCTGGTTAAATTACAAGGATGGTGCCACAAAAATGAAGTATTACTCTTAGTTTACGACTACATGCCGAAAGGAAGTTTAGACAGTCACATATTCTGCGAAGAAGGAACAAGCACATCCCCACTAAGTTGGCATCTCAGATACAAAATCCTCTCAGGCGTCGCATCTGCATTGAACTACCTTCACAATGAATACGATCAAACAGTAGTCCACCGAGACCTCAAAGCAAGCAACATAATGCTAGACTCAGACTACAACGCACGATTAGGCGATTTCGGCCTAGCGCGTGCACTTGAAAACGAAAAAACATCATATTTAGCAGAACTAGAAGGTATACAAGGAACAATGGGATACATAGCGCCAGAATGTTTCCACACGGGAAAAGCAACAAGAGAATCAGATGTGTATGGATTTGGTGCAGTGTTACTTGAAACTGTTTGTGGACAAAGACCTTCTTGGACTAAGATAGAAGGGTATCAGTTTCTGGTTGATTGGGTTTGGTATTTGCACCGCGAAGGGAGGATATTAGATGCAGTTGATCAAAGTGTTGGTAGTGATTATGATGTTGAAGAAGCAGAGAGGATACTGAAATTAGGATTGATTTGTTCTCATCCTATTGCTGGTGAGAGACCAAATTTGCAAAGTATTGTTCAAATTTTATCTGGGTCAGTGAATGTGCCTCATGTGCCACCTTTTAAACCGTCTTTTATGTGGCCAGCTGTGGATTTAGCTAGTCTTGCCAGTACTGATTTTACAAAAACAAATACTAGTGAGTATACACCAATCAATAGTAACTCACAATCTTCGGTGCGTGTTCCATTCTCAGATAAGAGCTCTTTGGTGTAA 2100 0.4186 MLPIQCRRHLHHHTAYLTAVVAILFLLPEVTSQAQILKREFYSYETFNASNQHFFETLASATIHLDAFQVTPDSAGSTTIVSMNNNSGRVFFKDSFKLWEDSSPTGKLVSFNTSFLINMLPYLNQTPGEGLAFLIAPSISIPLNSYGGYLGLTNASTDGNSTNRFIAIELDTVKQSYDPDNNHMGLNINSVHSNVTVPLDFEIAPKVAKIFALWVEYDGDRRNIDVYITEQPSKDAPIAEKPVKPILSSGLDLKQILSQDSYFGFSASTGNTVELNCVLKWNISIEVFDEKNDKGLTIGLGVGVPVLVLILLGGGFWYYCYVYKKKKNDENGSNSQIMGTLKSLPGTPREFSYKELKKATNNFDEKNKLGQGGYGVVYRGTLVKDNLEVAVKMFSRDKMKSTDDFLAELTIINRLRHKHLVKLQGWCHKNEVLLLVYDYMPKGSLDSHIFCEEGTSTSPLSWHLRYKILSGVASALNYLHNEYDQTVVHRDLKASNIMLDSDYNARLGDFGLARALENEKTSYLAELEGIQGTMGYIAPECFHTGKATRESDVYGFGAVLLETVCGQRPSWTKIEGYQFLVDWVWYLHREGRILDAVDQSVGSDYDVEEAERILKLGLICSHPIAGERPNLQSIVQILSGSVNVPHVPPFKPSFMWPAVDLASLASTDFTKTNTSEYTPINSNSQSSVRVPFSDKSSLV 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02704 699 FunFam probable L-type lectin-domain containing receptor kinase S.5 348 439 - -
Vivi2g02704 699 SUPERFAMILY Protein kinase-like (PK-like) 345 666 IPR011009 -
Vivi2g02704 699 CDD lectin_legume_LecRK_Arcelin_ConA 42 282 IPR001220 GO:0030246
Vivi2g02704 699 PANTHER - 73 649 - -
Vivi2g02704 699 FunFam probable L-type lectin-domain containing receptor kinase S.5 440 643 - -
Vivi2g02704 699 CDD STKc_IRAK 369 638 - -
Vivi2g02704 699 Gene3D Phosphorylase Kinase; domain 1 348 439 - -
Vivi2g02704 699 Pfam Protein kinase domain 364 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02704 699 SUPERFAMILY Concanavalin A-like lectins/glucanases 42 286 IPR013320 -
Vivi2g02704 699 SMART serkin_6 363 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02704 699 ProSiteProfiles Protein kinase domain profile. 363 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02704 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Vivi2g02704 699 Gene3D Transferase(Phosphotransferase) domain 1 440 645 - -
Vivi2g02704 699 ProSitePatterns Protein kinases ATP-binding region signature. 369 392 IPR017441 GO:0005524
Vivi2g02704 699 MobiDBLite consensus disorder prediction 675 699 - -
Vivi2g02704 699 Pfam Legume lectin domain 42 291 IPR001220 GO:0030246
Vivi2g02704 699 Gene3D - 41 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02704 Vivi-Chr2 121476738 121481123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02704 84 654 Receptor kinase-like Gene Family AT5G55830 37.624 1.10e-124 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi2g02704 Pkinase 7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02704 - - tpra:123907446 1068.91