Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02682 ATGGCAGCAATAGTTTCAGGATCAATGGGGAATGACGCATGGAAGGCGCATGTGGGTATGGCATTGGTGCAGCTTTTCAATGGTGGCTACCATGTAATTACCAAAGTGGCCCTTAACGTTGGGGTTAACCAATTAGTCTTTTGCCTCTATAGAGATCTACTTGCACTCTCTATCCTTGCTCCTATCGCTTATATCCGTGAAAAACGGACACGACCGCCCATTACTAAGAACCTCCTGATATCATTCTTTTTCCTTGGATTAACTGGGATATTTGGCAACCAACTTCTGTTTCTTCTTGGCTTAAGCTATACAAATCCAACTTATGCTGCTGCCACACAGCCGGCCATTCCAGTCTTTACATTTTTATTTGCTGTAATAATGGGTACAGAAAGAGTGAACTTGCTCAGATATGAAGGTCTGGCAAAGGTTGTAGGAACTATTATCTGTGTTTCGGGTGCCATATTGATGGTTTTGTATCGCGGTCCAGCTGTAATAGGAAATGCAGAAATTGATCATGTAGCACAAAATGAAATTAGTGCGAGAGGTCAGCCAGAGCCTTCTGGATGGTTTTTTGGCGGTTTACAGGATCTCGGGTTTGACCATTTTCATCTTGGGGTTCTGTGCTTGATAGGGAACTGCATGTGTATGGCTGCTTTTCTAGCCATTCAGGCACCGGTGTTAAAAAAGTATCCTTCAAACCTATCTGTCACGGCATATTCATACTTCTTCGGAGCTGCTCTGATGGTGATGGTGTCATTTTTAATTACTAACGAATCAACTAACTGGAGTCTGACATCATCCGAAATACTTGCTGTTATCTATGCTGGAACTATTGCATCTGCGCTTAACTATGGACTCATTACATGGTGCAATAAGATTTTAGGTCCAGCTTTGGTTGCCCTATACAATCCACTTCAACCCGGCTTTTCTGCCATACTGTCTCAGATATTCCTCGGAAGTCCAGTTTACTTGGGAAGCATCATAGGTGGATCGTTTATCATTGCTGGTCTATATACAGTTACTTGGGGATCGTATAGAGAAAGACGAGCAACAGTTGTAGTTACTCCTCACGGTCCCGGGGAAACTGAGCCACTTATCCTTGATAAAACTGCATATCAGATAGAAAAATGGATGATGAATAACCATACATACATGGCCAAGTGTCCCAACATGCTTAAGTGCGTCAGGATTAAGCTAAATTAA 1203 0.4256 MAAIVSGSMGNDAWKAHVGMALVQLFNGGYHVITKVALNVGVNQLVFCLYRDLLALSILAPIAYIREKRTRPPITKNLLISFFFLGLTGIFGNQLLFLLGLSYTNPTYAAATQPAIPVFTFLFAVIMGTERVNLLRYEGLAKVVGTIICVSGAILMVLYRGPAVIGNAEIDHVAQNEISARGQPEPSGWFFGGLQDLGFDHFHLGVLCLIGNCMCMAAFLAIQAPVLKKYPSNLSVTAYSYFFGAALMVMVSFLITNESTNWSLTSSEILAVIYAGTIASALNYGLITWCNKILGPALVALYNPLQPGFSAILSQIFLGSPVYLGSIIGGSFIIAGLYTVTWGSYRERRATVVVTPHGPGETEPLILDKTAYQIEKWMMNNHTYMAKCPNMLKCVRIKLN 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02682 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 158 - -
Vivi2g02682 400 PANTHER WAT1-RELATED PROTEIN 18 348 IPR030184 GO:0016020|GO:0022857
Vivi2g02682 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 347 - -
Vivi2g02682 400 Pfam EamA-like transporter family 204 341 IPR000620 GO:0016020
Vivi2g02682 400 Pfam EamA-like transporter family 19 156 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02682 Vivi-Chr2 120256375 120261222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02682 5 275 Nodulin-like Gene Family AT3G45870 68.266 1.50e-124 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02682 - - psat:127119930 682.559