Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02675 ATGGATCCAAATCTACAACGGGAATGGTCCTTCAATGACTTCGAGATCGGAAAGCCACTCGGGAAAGGGAAGTTCGGCCGAGTCTACGTCGCCAGAGAAGTCAAGGTTATATATAAGGAGCAACTTGAAAAATATAAACTTCACCATCAATTGAGGAGAGAAGTGGAGATACAGATAAGTCTTAAACATCCGAACATCTTGCGTCTCTATGGTTGGTTTCATGATTCCGAGCGTGTTGTGTTGATTCTTGAATATGCTTATAATGGTGAGCTATACAAGGAGCTTAGCAAAAGACATCATTTCTCCGAGAAGGAAGCTGCAACGTACATTTTAAGCCTGACAGAGGCATTGGCATATTGTCATGAGAAGCATGTTATTCATAGGGATATCAAGCCTGAAAATTTGTTGCTCGACCACGAGGGTCGTCTTAAGATTGCAGACTTTGGTTGGTCTGTGCAATCTAAAATGAAAAGACAAACCATGTGTGGGACATTGGATTATTTAGCTCCTGAAATGGTTGAAAACAAAGGTCATGATTATGCTGTTGATAACTGGACTCTGGGTATCCTTTGCTATGAGTTCCTTTATGGTGCTCCTCCATTTGAGGCTGAGAGTCAAATTGATACCTTCCAAAGGATAAAAAATGTTGATTTGATCTTTCCTCCTAGCCCTATTGTTTCTTCAGATGCCAAAAACCTTATAAAACGGCTCCTGGTAAAAGATTCCTCAAGAAGGCTCTCACTCCAGAAGATAATGGAGCATCCTTGGATAATCAAGAATGCAAATTGTATCGGTGACTGCACGTAG 807 0.4114 MDPNLQREWSFNDFEIGKPLGKGKFGRVYVAREVKVIYKEQLEKYKLHHQLRREVEIQISLKHPNILRLYGWFHDSERVVLILEYAYNGELYKELSKRHHFSEKEAATYILSLTEALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSKMKRQTMCGTLDYLAPEMVENKGHDYAVDNWTLGILCYEFLYGAPPFEAESQIDTFQRIKNVDLIFPPSPIVSSDAKNLIKRLLVKDSSRRLSLQKIMEHPWIIKNANCIGDCT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02675 268 SMART serkin_6 14 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02675 268 PIRSF ILK 2 261 - -
Vivi2g02675 268 Gene3D Transferase(Phosphotransferase) domain 1 6 266 - -
Vivi2g02675 268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Vivi2g02675 268 ProSiteProfiles Protein kinase domain profile. 14 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02675 268 Pfam Protein kinase domain 14 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02675 268 FunFam Aurora kinase A 6 89 - -
Vivi2g02675 268 SUPERFAMILY Protein kinase-like (PK-like) 7 260 IPR011009 -
Vivi2g02675 268 FunFam Serine/threonine-protein kinase ark1 6 266 - -
Vivi2g02675 268 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 6 260 IPR030616 GO:0004672
Vivi2g02675 268 CDD STKc_Aurora 13 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02675 Vivi-Chr2 120100535 120103304 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02675 6 260 CBL-interacting serine-threonine protein kinases AT5G10930 38.519 5.48e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Vivi2g02675 Pkinase 2.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02675 K08850 - gmx:100775802 467.233