Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02672 ATGGGGGGTGACACATGGAAGGCCCATTTCGGCATGGCGCTTGTGCAGCTACTATATGGTGGCTACCATGTCATCACCAAAGTGGCCCTTAATGTTGGAGTCAACCAACTTGTCTTCTGCTTCTATAGAGATCTCCTTGCTCTCATCATCCTTTCTCCAGTTGCTTTTTTCAAAGAAAGACAGACAAGGCCACCCATTACTAAGAAGCTATTAATGTCATTCTTCTTTCTTGGATTGACTGGGATATTTGGTAACCAGCTCTTGTTTCTTATTGGATTAAGTTATACTAATCCAACTTATGCTGCTGCCTTACAACCAGCTATTCCTGTCTTCACCTTTCTATTTGCTGTCATAATGAGTATAGAAAGAGTGAATTTGAAGAGCTTTGAAGGTCTGGCAAAAGTTGGAGGAACTCTTATCTGTGTTTCGGGCGCGGTGTTGATGGTTTTGTATCGCGGTCCATCGTTGATAGGAAATACAGAACCGGTCACTATACCACGGAATGAAATAAGTGTTAACGGTCAGCTAGAGCCCTCTGGATGGTTGATAAGTGGTTTAAAGGATCTTGGATCAGATAATTTTGAACTTGGAGTTGTATTCTTGATAGGGAACTGCATGTGCATGGCTGCTTTTCTAACCATTCTGGCACCGGTATTAAAAAAGTATCCTGCAAATCTATCTGTAACATCGTATTCATTCTTCTTTGGAGTTGTTCTTATGGCCATAGTCTCGTTATTCATGACCGATCTATCAAGTGACTGGATTTTGACACAATCAGAAATACTAGCTATTGTTTATGCTGGAACTATTGCATCTGCCTTTAACTATGCAGTCATTAGTTGGTGCAACAAGATATTAGGGCCAGCTTTGGTTTCCCTATACAATCCACTTCAACCTGGATTTTCTGCTCTACTGTCTCAGATATTCCTTGGAAGTCCAATTTACTTGGGAAGTATCATAGGGGGGTCTTTCATCATTGCTGGTCTTTATACTGTTACATGGGCATCTTATAAAGAAAAACAGGCAATTGTTGAAATTACTTCTCATGAATCTTGGGTCTCCAAACCACTTATTCATGAAAAAACTGCACACCAAAGAGATCATATATTTTCAGCGTCCTCCAGCGCATCATAA 1134 0.4056 MGGDTWKAHFGMALVQLLYGGYHVITKVALNVGVNQLVFCFYRDLLALIILSPVAFFKERQTRPPITKKLLMSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAALQPAIPVFTFLFAVIMSIERVNLKSFEGLAKVGGTLICVSGAVLMVLYRGPSLIGNTEPVTIPRNEISVNGQLEPSGWLISGLKDLGSDNFELGVVFLIGNCMCMAAFLTILAPVLKKYPANLSVTSYSFFFGVVLMAIVSLFMTDLSSDWILTQSEILAIVYAGTIASAFNYAVISWCNKILGPALVSLYNPLQPGFSALLSQIFLGSPIYLGSIIGGSFIIAGLYTVTWASYKEKQAIVEITSHESWVSKPLIHEKTAHQRDHIFSASSSAS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02672 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 151 - -
Vivi2g02672 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 338 - -
Vivi2g02672 377 Pfam EamA-like transporter family 9 133 IPR000620 GO:0016020
Vivi2g02672 377 Pfam EamA-like transporter family 196 333 IPR000620 GO:0016020
Vivi2g02672 377 PANTHER WAT1-RELATED PROTEIN 10 347 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02672 Vivi-Chr2 120066618 120069462 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02672 4 267 Nodulin-like Gene Family AT3G45870 63.258 1.37e-109 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02672 - - gmx:100793730 558.525