Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02635 ATGTTTCCTACATTTTCATTTTGGTTTTTTTTACTCCTTATTTTCAACTTCTGGCCAATAACAACTGCATTTACATTAGGAAACAAGACTGATCATTTAGCATTGCTCAAATTCAAGCAATTAATAACCAATGACCCATATGGAATCCTTGATTCTTGGAATGGTTCCAGCCATTTCTGCAAATGGCACGGAATCACATGCAACCCCGTATATCAAAGAGTTAGCAAATTAAACTTACCTGGATACAAGCTGCATGGATCCTTATCTTCTCATGTAGCCAATCTCTCTTTTCTGAAGATTATCAACCTTGCAGACAACAAGTTCTTTGGAAAAATCCCACAAGAGTTCGGTCACTTGTTACAATTACAACAACTCTATCTCACCAATAACTCGTTTGATGGAAAAATTCCGATAAACTTGACAAATTGTTACAACCTTATATACTTAAGCTTGAGAGGGAACAATTTGATTGGAAAAATACCAATTGAAATTGGCTCTCTTCAAAAGCTTAAAAAATTGACTGTTAGGGGTAACAATTTGATAGGAGGAGTCCCATCAAGCATAGGGAACCTTTCATTACTAACCGGTCTTTCAGTTTCTTATAACAATTTAGAGGGAGATATTCCACAAGAAATATGCCGCCTCAAAAACTTGTCATCGTTAGTTTTATTTGCCAATTATTTGTCTGGTACATTTCCTCTTTGTGTATACAATATGTCATCTCTTACTATGATCTCAGCTGCACAAAATCAGTTTAGCGGCTCTCTTCCACCCAACATGTTTAACAACCTCCCTAATCTCCAGGATTTTTTAATTGGTGATAATTATGTCTCAGGTCTAATGCCCACTTCTGTTGCAAATGCTTCTACCCTGACAACACTTGATGTCGGAAAAAACAATTTAGCCGGAAAAGTTCCAAGTCTTGGGAGGCTAAAATATCTTGGGAGTATAAATTTAGAAATAAATAATTTTGGTTACAATTCAAGTAATGACTTAGAATTTTTGAAATCATTGATAAATTGTAGTAACTTAGAAGTGGTTTCAATATCCTATAATAATTTTGGAGGTAGTTTGTCAGGTTTCATAGGCAACTTATCCACCCAACTTAGTCGACTATATCTTGGGTATAATCAAATATATGGGAAAATTCCTTTAGAATTAGGAAATCTAAATAGTTTAATTCTCTTAGACATGGGAGACAATCATTTTCAAGGGAGAATTCCCTCTGCTATTGGGAAGTTTCAAAGGCTGCAAGTGTTAAATTTGGGTGGGAACAACTTGTCAGGTGAAATACCATCCTTTATAGGAAACCTTAGTCGGCTGTATCGTTTGAATTTAGGAAAAAACATGTTTGAGGGAACTATTCCTACAAGTATAGGGAACTGCCAAAACATACAAATATTAGACTTTTCAAAAAACAACCTTAGAGGAGTCATACCCTTAGAGGTCTTCAATATTTCATCTTTAACAAAAGGATTGTTCTTATCACAAAACTTTTTGAGTGGCAGCCTACCTGATGAACTCGGTCATCTACAAAATATTGTAAAGATTGATGTCTCAAAAAATCGTTTGTCTGGTAAGATTCCTATAACCGTGGGGAAATGCATATGCTTAGAATACCTTATTTTGGCAGAGAATTCATTCAATGGAAGCATACCTTACTCTTTGGAATCTGTCAAAGTTCTTAAAGTGTTGGACCTTTCAAGAAACCAACTGTCTGGATTGATTCCAAATGCTTTGCAAAATATTTCTTCCTTAGAATATTTCAATGTATCATTCAACATGTTGGAAGGAGAGGTACCAACTAAAGGTGTCTTTAGAAATGCAAGTGCATTTACAGTGATTGGAAACAATAAGCTTTGTGGAGGAATTTTGGAGTTACATCTATCACCATGCCCTATTAAAGGTACGAAACTTGCAAATCACCATAATTTCAAGTTGATGGTACTGATAGTTAGTGTGATTTCTTTTCTTTTCATTATGCTATCTATTCTGGCAATCTATTGGAGGAGGGGAACGATAAAAAAACCATCTTTTGATTCACCTATAATTGATCAGATGATTAAGGTTTCGTACCAAAACCTGCACAGGGCAACCAATGGGTTCTCGAAGAGCAACTTGATAGGATCTGGAAATTTTGGTTCTGTCTACAAAGGAACACTTGCGTCGATTGACGGATTTGTTGCCATAAAAGTTCTAAACCTTACAAAGAAGGGATCTCACAAGAGTTTCATTGCTGAATGTAATGCACTAAAAAATATTAGACACCGGAATCTAGTTAAAATTCTGACATGTTGTTCCAGCACAGATTATAAAGGAAATGAGTTTAAAGCTCTTGTATTTGAGTACATGAGAAATGGAAACTTAGAAAGTTGGTTGCATCCCTCAACAGAAATTACAGATGAGCCCAAATCATTAAATCTTGAGCAAAGGTTCAATATTATTATTGATGTTGCTTCAGCCTTTTGTTATCTTCACTACGAATGCGAGCAACCTGTCATTCATTGTGATTTAAAGCCTGCAAATGTTCTTCTTAATGACACCCTTGTGGCACAAGTGAGTGATTTTGGCTTAGCAAGGTTGGTATCAAGTGCTTGTATCTCTCTGAAGCAAAGTAGCACAATTGGGATAAAGGGGACAGTTGGTTATGCACCCATAGAGTACGGAATGGGTTCGGAAGTGTCTATGGAAGGCGACATGTATAGCTTTGGAATATTGGTATTAGAAATGTTAACCGGAAGGAGACCCACAGATGAAATGTTTAAAGATGATCATAATCTCCATAATTATGTGAAACTCTCAATTCCAAATCACCTTTTCGAGATTGTGGACCGGTCTATTCTCCCCGTTGAATTAGAAAACAATACTGAGAATGGGAACTCTGGTAGTATAGATCCTAATGTAGAAAAATGTCTACTTTCAATTTTTAGGATTGCACTTTCTTGTTCAGTGGAATCACCAAAAGAAAGAATGAACATGGTGGATGTTATAAGGGAACTCAACGTCATTAAATGCTTCTTTCCTTTCAACTAA 3033 0.3587 MFPTFSFWFFLLLIFNFWPITTAFTLGNKTDHLALLKFKQLITNDPYGILDSWNGSSHFCKWHGITCNPVYQRVSKLNLPGYKLHGSLSSHVANLSFLKIINLADNKFFGKIPQEFGHLLQLQQLYLTNNSFDGKIPINLTNCYNLIYLSLRGNNLIGKIPIEIGSLQKLKKLTVRGNNLIGGVPSSIGNLSLLTGLSVSYNNLEGDIPQEICRLKNLSSLVLFANYLSGTFPLCVYNMSSLTMISAAQNQFSGSLPPNMFNNLPNLQDFLIGDNYVSGLMPTSVANASTLTTLDVGKNNLAGKVPSLGRLKYLGSINLEINNFGYNSSNDLEFLKSLINCSNLEVVSISYNNFGGSLSGFIGNLSTQLSRLYLGYNQIYGKIPLELGNLNSLILLDMGDNHFQGRIPSAIGKFQRLQVLNLGGNNLSGEIPSFIGNLSRLYRLNLGKNMFEGTIPTSIGNCQNIQILDFSKNNLRGVIPLEVFNISSLTKGLFLSQNFLSGSLPDELGHLQNIVKIDVSKNRLSGKIPITVGKCICLEYLILAENSFNGSIPYSLESVKVLKVLDLSRNQLSGLIPNALQNISSLEYFNVSFNMLEGEVPTKGVFRNASAFTVIGNNKLCGGILELHLSPCPIKGTKLANHHNFKLMVLIVSVISFLFIMLSILAIYWRRGTIKKPSFDSPIIDQMIKVSYQNLHRATNGFSKSNLIGSGNFGSVYKGTLASIDGFVAIKVLNLTKKGSHKSFIAECNALKNIRHRNLVKILTCCSSTDYKGNEFKALVFEYMRNGNLESWLHPSTEITDEPKSLNLEQRFNIIIDVASAFCYLHYECEQPVIHCDLKPANVLLNDTLVAQVSDFGLARLVSSACISLKQSSTIGIKGTVGYAPIEYGMGSEVSMEGDMYSFGILVLEMLTGRRPTDEMFKDDHNLHNYVKLSIPNHLFEIVDRSILPVELENNTENGNSGSIDPNVEKCLLSIFRIALSCSVESPKERMNMVDVIRELNVIKCFFPFN 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02635 1010 Pfam Leucine rich repeat 538 596 IPR001611 GO:0005515
Vivi2g02635 1010 Gene3D Transferase(Phosphotransferase) domain 1 784 1005 - -
Vivi2g02635 1010 SUPERFAMILY L domain-like 369 622 - -
Vivi2g02635 1010 Pfam Leucine Rich Repeat 416 438 IPR001611 GO:0005515
Vivi2g02635 1010 Pfam Protein tyrosine and serine/threonine kinase 705 933 IPR001245 GO:0004672|GO:0006468
Vivi2g02635 1010 ProSitePatterns Protein kinases ATP-binding region signature. 708 731 IPR017441 GO:0005524
Vivi2g02635 1010 Gene3D Ribonuclease Inhibitor 327 632 IPR032675 -
Vivi2g02635 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Vivi2g02635 1010 Gene3D Ribonuclease Inhibitor 28 187 IPR032675 -
Vivi2g02635 1010 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 784 1008 - -
Vivi2g02635 1010 SUPERFAMILY Protein kinase-like (PK-like) 678 1002 IPR011009 -
Vivi2g02635 1010 FunFam LRR receptor-like serine/threonine-protein kinase EFR 674 783 - -
Vivi2g02635 1010 SMART LRR_typ_2 119 143 IPR003591 -
Vivi2g02635 1010 SMART LRR_typ_2 414 438 IPR003591 -
Vivi2g02635 1010 SMART LRR_typ_2 191 215 IPR003591 -
Vivi2g02635 1010 SMART LRR_typ_2 559 582 IPR003591 -
Vivi2g02635 1010 SMART LRR_typ_2 239 263 IPR003591 -
Vivi2g02635 1010 Gene3D Ribonuclease Inhibitor 192 258 IPR032675 -
Vivi2g02635 1010 Coils Coil 1009 1010 - -
Vivi2g02635 1010 SUPERFAMILY L domain-like 30 324 - -
Vivi2g02635 1010 PANTHER OS04G0122200 PROTEIN 214 1002 - -
Vivi2g02635 1010 Gene3D Phosphorylase Kinase; domain 1 670 783 - -
Vivi2g02635 1010 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 69 332 - -
Vivi2g02635 1010 Gene3D Ribonuclease Inhibitor 259 326 IPR032675 -
Vivi2g02635 1010 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Vivi2g02635 1010 SMART serkin_6 702 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02635 1010 FunFam LRR receptor-like serine/threonine-protein kinase EFR 333 638 - -
Vivi2g02635 1010 ProSiteProfiles Protein kinase domain profile. 702 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02635 Vivi-Chr2 118396530 118399941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02635 21 1007 Receptor kinase-like Gene Family AT3G47570 44.745 0.0 818
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi2g02635 PK_Tyr_Ser-Thr 1.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02635 - - gmx:100786600 1259.59