Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02632 ATGAAGTCTTTTATTTTCTTGTCATCTATACTTTTATACCTTCATCTTCTTTTTCTGGTCACCTTAACTTTAATATGCTTTGGCTCAAACAAAATTATGGCAGTGACATTAGGAAACCAAACTGATCATTTAGCATTGCTCAAATTCAAAACATCAGTAACTAGTGATCCATATACAACTCTTGAATCTTGGAATTCTTCCATCCACTTCTGCAAGTGGTATGGAATCACATGCAGCCCCATGCATCAAAGAGTGATTGAGTTGAACTTAGATGGATATGAGTTACATGGATCTTTATCTCCCTATGTTGGCAATCTCACTTTTTTGAAAGCTCTCAACCTAGGAAACAACAGTTTCTTTGGAAAAATTCCACAGGAATTAGGTAAGTTGCTACAATTGCAACATCTTCGTCTCACCAATAACTCATTTGCAGGTGAAATTCCTACAAACTTGACATATTGCTCCAATCTCAAATACTTGTATTTGGGAAACAACAATCTAACTGGCAAAATACCAATTGAAATTGGTTCTTTGAAAAAGCTTCATTATTTTGTTGTTTCGAAAAACAATTTAACTGGAGGAGTCTCTTCATCCATAGGCAATCTTTCAACCTTAATTTTTTTTTCGTGTGCTTTTAACAACTTAGAAGGGGAAATTCCACAGGAAATATGTCGCCTAAAAAGCCTAAAATTTTTAGGTTTCCCTGCCAATAATTTATCTGGTTTAATTCCTTCTTGTCTTTACAACATTTCAACACTTACTACACTTTCCTTGACAGATAATAGCTTTCATGGTTCTCTCCCACCTAACATGTTCCACACCCTCCCCGATCTCCAAATATTTGAAATTGCAGGAAATTATTTTTCAGGTCCATTCGTCACTTCCATAATAAATGCAACTTCCATTATAACATTTGAAATAAGTACAAATTACCTTGTGGGACAAGTTCCAAGTTTAGGAAGACTAAAAGATTTACAAAATCTGAATTTGGAACAAAACAAATTAAGTAACAATTCTAATAAAGATTTGGAGTTTCTTAATTCTTTGTCAAACTGTAGTAGATTGTATGGGGTTTCTATTATGGGTAATAATTTTGGCGGTATTCTGCCAAAGTCAATAGGCAATTTATCCACCGAACTTGAACTACTATTTCTTGGGGGTAATATGATATCGGGACAAATTCCTGCTGACTTAGGTTGTCTAGTTGGCTTAATTCTCTTGACAATGGAACTTAATCATTTTGAAGGAAATATTCCAACTACTTTTGGGAGTTTTCAAAAGATGCAGCAGTTAAGTTTGAGCGGAAACAAGTTGTCTGGAGATATACCATCCTCTATAGGTAATCTTAGTCAATTGTATCTTTTGACTTTAAATCTTAATATGCTTGAAGGACATATTCCTCTAAGCTTAGGAAATTGTCAAAAGTTACAACTTCTAGACCTTTCAGAAAACAAGCTTATAGGAACCATACCTTTAGAAGTTTTTAATCTTGTTTCTTTAACAAACTTATTAGACTTATCACATAACTCTTTCAATGGTAGCTTATCAAGAGAAGTGAGTATGCTAAAAAATATTGGTTCGATAAATTTCTCTTATAATCATTTGTCGGGGGAGATTCCGATATCTATTGGTGAATGCACAACCTTAGAATACCTTGATTTGCAAGGGAACTCCTTCAACGGAACAATACCATCCTCGTTGGCTTCTCTCAAAGGTCTTCAATATTTAGACCTTTCATTGAATCAATTGTCCGGTTCAATTCCTGATGTTCTACAAAATATCTCAGGTTTAAAACACTTGAATGTTTCTTTTAACATGTTGGAAGGTGAGGTACCAACAGAAGGTGTTTTTGGAAATTCAACCCAAATAGGAATAATTGGAATACAAAAGATTTGTGGAGGTATTTCACAACTGCATCTACCAGCGTGCCCCATCAAGGATAAAAAACACAGAAAACACCAAAATTTCTTGTTGATTGCAGTGATAATTGGTGTTCTTTGTTTTCTTCTCATACTGTCAATTTTTATAACTAGCTACTGGATGAGGAAAAGAAACCAAAAACGATCTTTTGATTCACCGACAGTTGATCAACTTGATAAGGTTTCATACCGAGACTTATATCGAGGAACCAATGGATTCTCAATTACAAACTTAATTGGATCAGGAAGTTTTGGGTCTGTGTACAAAGGAAATCTTGTGTCAGAAGACAATTTTGTTGCCATAAAGGTCCTGAATCTCCAGAAGAAGGGAGCTCACAAGAGTTTTATTCTTGAATGCAATGCACTCAAAAATATTAGACACCGAAATTTAGTCAAGATTATAACATGTTGTTCAAGTTCAGATTATAAAGGTCAAGAATTTAAAGCTCTTGTTTTTTGTTACATGAAAAATGGAAGTTTGGAACAATGGCTGCATCCTGAGATTTTAAATGCAGAGAATCAAACAACATTGGACCTCACTCATAGAGTAAACATCATTACCGATGTTGCTTCGGCAGTACATTATCTTCATCAAGAATGTGAACAATTGATCATTCATTGTGATCTAAAGCCAAGTAATGTACTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGTATAGCAAGACTTGTCTCGGTCATTGATGATACCTCTCATAAGGATACCAGTACAATTGGAATAAAAGGAACTGTTGGCTATGCTCCTCCGGAGTATGGAACGGGGTCTGAAGTGTCTGCATGTGGTGACATGTATAGCTTTGGAATCTTGATGTTGGAAATTCTTACTGGTCGAAGACCCACAAATGAAGTTTTTGAAAATGGCCAAAATCTACATAACTATGTCGCAACTTCATTTCCTGATAACGTTATAAAGATTTTGGACCCGCATCTTGTATCAAGAGTTGCAACAGTAGAAATACAAGATGGAAATTATGAGATTCTTATTCCAAATGTTGAGGAGTGCTTGATTTCACTCTTTAGGATTGGACTTTTGTGTTCAATGGAATCACCAAAAGAAAGAATGAATATTGTGGAAGTCACAAAAGAGCTTAACATAATCAAAAAGACTTCTCTCGTTGGTGAGATGATATTTTTTAGTGTTTATTTGAATCATTAG 3102 0.3482 MKSFIFLSSILLYLHLLFLVTLTLICFGSNKIMAVTLGNQTDHLALLKFKTSVTSDPYTTLESWNSSIHFCKWYGITCSPMHQRVIELNLDGYELHGSLSPYVGNLTFLKALNLGNNSFFGKIPQELGKLLQLQHLRLTNNSFAGEIPTNLTYCSNLKYLYLGNNNLTGKIPIEIGSLKKLHYFVVSKNNLTGGVSSSIGNLSTLIFFSCAFNNLEGEIPQEICRLKSLKFLGFPANNLSGLIPSCLYNISTLTTLSLTDNSFHGSLPPNMFHTLPDLQIFEIAGNYFSGPFVTSIINATSIITFEISTNYLVGQVPSLGRLKDLQNLNLEQNKLSNNSNKDLEFLNSLSNCSRLYGVSIMGNNFGGILPKSIGNLSTELELLFLGGNMISGQIPADLGCLVGLILLTMELNHFEGNIPTTFGSFQKMQQLSLSGNKLSGDIPSSIGNLSQLYLLTLNLNMLEGHIPLSLGNCQKLQLLDLSENKLIGTIPLEVFNLVSLTNLLDLSHNSFNGSLSREVSMLKNIGSINFSYNHLSGEIPISIGECTTLEYLDLQGNSFNGTIPSSLASLKGLQYLDLSLNQLSGSIPDVLQNISGLKHLNVSFNMLEGEVPTEGVFGNSTQIGIIGIQKICGGISQLHLPACPIKDKKHRKHQNFLLIAVIIGVLCFLLILSIFITSYWMRKRNQKRSFDSPTVDQLDKVSYRDLYRGTNGFSITNLIGSGSFGSVYKGNLVSEDNFVAIKVLNLQKKGAHKSFILECNALKNIRHRNLVKIITCCSSSDYKGQEFKALVFCYMKNGSLEQWLHPEILNAENQTTLDLTHRVNIITDVASAVHYLHQECEQLIIHCDLKPSNVLLDDDMVAHVSDFGIARLVSVIDDTSHKDTSTIGIKGTVGYAPPEYGTGSEVSACGDMYSFGILMLEILTGRRPTNEVFENGQNLHNYVATSFPDNVIKILDPHLVSRVATVEIQDGNYEILIPNVEECLISLFRIGLLCSMESPKERMNIVEVTKELNIIKKTSLVGEMIFFSVYLNH 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02632 1033 SMART serkin_6 713 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02632 1033 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Vivi2g02632 1033 Pfam Protein kinase domain 715 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02632 1033 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 41 149 - -
Vivi2g02632 1033 Pfam Leucine Rich Repeat 156 176 IPR001611 GO:0005515
Vivi2g02632 1033 Pfam Leucine Rich Repeat 109 130 IPR001611 GO:0005515
Vivi2g02632 1033 FunFam LRR receptor-like serine/threonine-protein kinase EFR 341 649 - -
Vivi2g02632 1033 SMART LRR_sd22_2 425 451 - -
Vivi2g02632 1033 SMART LRR_sd22_2 570 596 - -
Vivi2g02632 1033 SMART LRR_sd22_2 322 343 - -
Vivi2g02632 1033 SMART LRR_sd22_2 154 175 - -
Vivi2g02632 1033 SMART LRR_sd22_2 377 392 - -
Vivi2g02632 1033 SMART LRR_sd22_2 178 204 - -
Vivi2g02632 1033 Gene3D Ribonuclease Inhibitor 340 644 IPR032675 -
Vivi2g02632 1033 SUPERFAMILY L domain-like 41 337 - -
Vivi2g02632 1033 ProSitePatterns Protein kinases ATP-binding region signature. 719 742 IPR017441 GO:0005524
Vivi2g02632 1033 FunFam LRR receptor-like serine/threonine-protein kinase EFR 684 794 - -
Vivi2g02632 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Vivi2g02632 1033 Gene3D Ribonuclease Inhibitor 274 339 IPR032675 -
Vivi2g02632 1033 SUPERFAMILY L domain-like 412 632 - -
Vivi2g02632 1033 Gene3D Transferase(Phosphotransferase) domain 1 795 1023 - -
Vivi2g02632 1033 SUPERFAMILY L domain-like 339 442 - -
Vivi2g02632 1033 Gene3D Ribonuclease Inhibitor 204 273 IPR032675 -
Vivi2g02632 1033 Gene3D Ribonuclease Inhibitor 150 203 IPR032675 -
Vivi2g02632 1033 Gene3D Ribonuclease Inhibitor 41 149 IPR032675 -
Vivi2g02632 1033 ProSiteProfiles Protein kinase domain profile. 713 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02632 1033 Pfam Leucine rich repeat 548 607 IPR001611 GO:0005515
Vivi2g02632 1033 SUPERFAMILY Protein kinase-like (PK-like) 688 1012 IPR011009 -
Vivi2g02632 1033 FunFam Leucine-rich repeat receptor protein kinase EMS1 150 244 - -
Vivi2g02632 1033 PANTHER OS04G0122200 PROTEIN 225 1016 - -
Vivi2g02632 1033 Gene3D Phosphorylase Kinase; domain 1 694 794 - -
Vivi2g02632 1033 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 795 1023 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02632 Vivi-Chr2 118307656 118310880 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02632 39 1017 Receptor kinase-like Gene Family AT3G47570 44.713 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi2g02632 Pkinase 4.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02632 - - gmx:100785561 1244.18