Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02631 ATGAAGCCTTTTTCTCTCTTGTCACCTACACTTTTATACCTTCATCTGTTTTTTCTTTGTTTTGCTTCAAACAAAATTGTGGCAGTGACATTAGGAAACCAAACAGATCATTTGTCATTGCTCAAATTCAAAGAATCAATAACCACTGATCCATATAGAACTCTTGAATGTTGGAATTCTTCCACCCACTTCTGCAAGTGGTTTGGAATCACATGCAACCCAGTGCATGAAAGAGTTATAGAGTTGAACTTAGATGGATCTGAATTACATGGATCTTTATCTCCCCATGTTGGCAATCTCTCTTTTCTGAAAATTCTCCACCTTAGGAACAACAGCTTCTTTGGAGAAATTCCACAGGAGTTAGGTCAGTTGCAACAATTGCAACGACTTTCTCTCACCAATAACTCGTTTGCAGGTCAAATTCCTACAAACTTGACATATTGCTCCAATCTCGCCAGCTTATTCTTGGATAACAACAATCTAATTGGTAAAATACCAACAGAAATTGGATCTTTGAAAAAGCTTCAAAATTTCACTGTTTATGGAAACAATTTAACGGGTGGAATCTCTTCATTCCTAGGGAATCTTTCAGGCTTAATGGGTTTTTCGTGTAACTCTAACAATATGCAAGGAGATATTCCACAAGAAATTTGTCATCTTAAAAACTTGTCACAATTACTTTTGGGTGAGAACAAATTTTCTGGTACCATTCCTTCCTGTCTTGGTACCATTTCATCCGTTACTATACTTGCCTTGACAGGTAATAGGTTTCATGGCTCTCTTCCACTCAACATGTTCAACACCCTCCCCAATCTCCACACTTTTGTCATTTCAGGAAATCAATTTTCAGGCCCAATCCCTACTTCCATAGTAAATGCATCTTCCATTATAGGTTTTGATATTAGTGAAAATCATTTTGTAGGACAAGTTCCAAGTTTAGGAAGGCTAAAAAATTTACAAACACTCAATTTGGAATTTAACAGTTTAGGTAGCAATTCAACTAAGGATTTGGAGTTTTTTAAATATTTGACAAACTGTAGTATACTAAACACGTTTAGTATCGCCTTTAATAATTTTGGAGGCATTCTGCCAAACTCTGTAGGAAGTTTATCCACTAAGCTTGAAAACCTAGATCTTGCATCTAATATGATTTCAGGAAAAATTCCCTCTGAGTTAGGATGTCTAGTAAATTTATTTTTATTGTACGTTGACTTTAACCAATTTGAAGGAAATATTCCCACTGCTTTTGGGAAGTTCCAAAAGATGCAAAAGTTAACTTTGAGCGGAAACAAGTTATCAGGAGATATACCACCCTTTTTAAGTAATCTTAGTCAATTGTATCTTTTGGAATTACATGGTAATATGTTTGGAGGAAATATTCCTCCAAGCATAGGAAACTGTCAAAAGCTGCAATATCTAGATCTTTCACAGAACAAGCTTAAAGGAGCCATCCCTTCAGAGGTTTTTAATCTATTATCTTTAACAAATTTATTGGACTTGTCACACAACTCTTTGAGTGGTAGCTTACCAGGACAAGTGGGTATGTTAAAAAATATTGGTAAGCTAGATGCCTCCAATAATCAATTGTCAGGAGATATTCCAATATCTATTGGTGAGTGCATAAGCTTAGAATACCTTCTTTTGCAAGATAACTCCTTCAACGGAACAATACCATCCTCTTTGTCTTCCCTCAAAGGTCTTCAATATTTAGACCTTTCGAAAAATCAATTGGCTGGTTCAATTCCTGATGTTATACAGAACATCTCGGGTTTAACATACTTGAATGTTTCTTTTAACATGTTGGAAGGTGAGGTACCAATATCTGGTGTCTTTGGAAATGCAACCCAAGTAGCAATGATTGGAAACAAAAAACTTTGTGGAGGTATTCCACAGATGCGCCTGCCAACATGCTCCGTCAAGGATAGGAAACACAGAAAGTACCATAAGTTCATATTGGAAGCTATTGGCGTGTTTTCTTTTCTTCTCATACTTTCAATTTTTCTAACTATTTATTGGTTGAGGAAAAGAAACCACAAACGATCTTTGGATTCACCAACACTTGATCAACTACATAAGGTTTCGTATCGAGACTTACATCGAGGAACCAATGGATTCTCGATTACAAACTTGATTGGATCAGGAAGTTTTGGTTCTGTGTACAAAGGAAACCTTGTGTCCGAAGACAATTTTGTTGCCATAAAGGTTCTGAATCTTCAAAAGAAGGGAGCTCACAAGAGTTTTCTTCTTGAATGCAATGCACTCAAAAATATACGTCACCGAAATTTGGTTAAGATTATAACATGTTGTTCTAGTTCAGATTATAAAGGTCAAGAATTTAAAGCTCTAGTTTTTGATTACATGAAAAATGGAAGCCTAGAACAATGGTTGCATTCAAATGTTTTAAATGCGGAGAGTCAAACAACATTGGACCTTGCTCATCGAATCAACATCATTATCGATGTTGCTTTGGCACTACACTATCTTCATCAAGAATGTGAACAGTTGATCCTTCATTGTGATCTAAAGCCAAGTAATGTACTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCCGCCATTAACAGTACTTCTCATAAGGATACAAGTTCAATCGGAATAAAAGGGATTGTTGGCTATGCTCCTCCAGAGTATGGAATGGGCTCTCAAGTGTCTACATGCGGTGACATGTATAGCTTTGGAATCCTGATTCTGGAAATGCTTACCGGTAAAAGACCCACAGATGAAGTTTTTGAAGATGGCCAAAATCTTCATAACTTTGTCGCAATATCATTTCCTAATAATCTTATAAAGATTTTGGACCCGAATCTTCTACCAAAAGATGGAGAAGTAGAAATACAAAATAGAAATCGTGAGAATATGATTCCAAATCTTGATGAGTGCTTAATTTCCCTATTCAGGATTGGACTGTTTTGTTCAATGGAATCACCGAAAGATAGATTGAATATTGTGGAAGTTACTAGAGAGCTTAGCATAATCAAAAAGACTTCTCTTACAGGTGTTCGCACTTATAATTAG 3060 0.3614 MKPFSLLSPTLLYLHLFFLCFASNKIVAVTLGNQTDHLSLLKFKESITTDPYRTLECWNSSTHFCKWFGITCNPVHERVIELNLDGSELHGSLSPHVGNLSFLKILHLRNNSFFGEIPQELGQLQQLQRLSLTNNSFAGQIPTNLTYCSNLASLFLDNNNLIGKIPTEIGSLKKLQNFTVYGNNLTGGISSFLGNLSGLMGFSCNSNNMQGDIPQEICHLKNLSQLLLGENKFSGTIPSCLGTISSVTILALTGNRFHGSLPLNMFNTLPNLHTFVISGNQFSGPIPTSIVNASSIIGFDISENHFVGQVPSLGRLKNLQTLNLEFNSLGSNSTKDLEFFKYLTNCSILNTFSIAFNNFGGILPNSVGSLSTKLENLDLASNMISGKIPSELGCLVNLFLLYVDFNQFEGNIPTAFGKFQKMQKLTLSGNKLSGDIPPFLSNLSQLYLLELHGNMFGGNIPPSIGNCQKLQYLDLSQNKLKGAIPSEVFNLLSLTNLLDLSHNSLSGSLPGQVGMLKNIGKLDASNNQLSGDIPISIGECISLEYLLLQDNSFNGTIPSSLSSLKGLQYLDLSKNQLAGSIPDVIQNISGLTYLNVSFNMLEGEVPISGVFGNATQVAMIGNKKLCGGIPQMRLPTCSVKDRKHRKYHKFILEAIGVFSFLLILSIFLTIYWLRKRNHKRSLDSPTLDQLHKVSYRDLHRGTNGFSITNLIGSGSFGSVYKGNLVSEDNFVAIKVLNLQKKGAHKSFLLECNALKNIRHRNLVKIITCCSSSDYKGQEFKALVFDYMKNGSLEQWLHSNVLNAESQTTLDLAHRINIIIDVALALHYLHQECEQLILHCDLKPSNVLLDDDMVAHVSDFGIARLVSAINSTSHKDTSSIGIKGIVGYAPPEYGMGSQVSTCGDMYSFGILILEMLTGKRPTDEVFEDGQNLHNFVAISFPNNLIKILDPNLLPKDGEVEIQNRNRENMIPNLDECLISLFRIGLFCSMESPKDRLNIVEVTRELSIIKKTSLTGVRTYN 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02631 1019 Pfam Leucine rich repeat 542 601 IPR001611 GO:0005515
Vivi2g02631 1019 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 75 338 - -
Vivi2g02631 1019 FunFam LRR receptor-like serine/threonine-protein kinase EFR 676 786 - -
Vivi2g02631 1019 SMART LRR_sd22_2 419 445 - -
Vivi2g02631 1019 SMART LRR_sd22_2 564 590 - -
Vivi2g02631 1019 SMART LRR_sd22_2 467 502 - -
Vivi2g02631 1019 SMART LRR_sd22_2 371 394 - -
Vivi2g02631 1019 SMART LRR_sd22_2 316 339 - -
Vivi2g02631 1019 Gene3D Transferase(Phosphotransferase) domain 1 787 1015 - -
Vivi2g02631 1019 ProSitePatterns Protein kinases ATP-binding region signature. 711 734 IPR017441 GO:0005524
Vivi2g02631 1019 Gene3D Phosphorylase Kinase; domain 1 686 786 - -
Vivi2g02631 1019 Gene3D Ribonuclease Inhibitor 345 639 IPR032675 -
Vivi2g02631 1019 PRINTS Leucine-rich repeat signature 470 483 - -
Vivi2g02631 1019 PRINTS Leucine-rich repeat signature 564 577 - -
Vivi2g02631 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Vivi2g02631 1019 ProSiteProfiles Protein kinase domain profile. 705 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02631 1019 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 346 1005 - -
Vivi2g02631 1019 SMART LRR_typ_2 564 587 IPR003591 -
Vivi2g02631 1019 SMART LRR_typ_2 468 491 IPR003591 -
Vivi2g02631 1019 SMART LRR_typ_2 100 124 IPR003591 -
Vivi2g02631 1019 SMART LRR_typ_2 220 244 IPR003591 -
Vivi2g02631 1019 SMART LRR_typ_2 316 339 IPR003591 -
Vivi2g02631 1019 SMART LRR_typ_2 443 467 IPR003591 -
Vivi2g02631 1019 SUPERFAMILY L domain-like 330 634 - -
Vivi2g02631 1019 Gene3D Ribonuclease Inhibitor 266 344 IPR032675 -
Vivi2g02631 1019 Gene3D Ribonuclease Inhibitor 144 199 IPR032675 -
Vivi2g02631 1019 Gene3D Ribonuclease Inhibitor 36 143 IPR032675 -
Vivi2g02631 1019 Gene3D Ribonuclease Inhibitor 200 265 IPR032675 -
Vivi2g02631 1019 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 787 1016 - -
Vivi2g02631 1019 Pfam Protein kinase domain 707 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02631 1019 SUPERFAMILY Protein kinase-like (PK-like) 679 1004 IPR011009 -
Vivi2g02631 1019 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Vivi2g02631 1019 FunFam LRR receptor-like serine/threonine-protein kinase EFR 339 643 - -
Vivi2g02631 1019 SMART serkin_6 705 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02631 1019 SUPERFAMILY L domain-like 35 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02631 Vivi-Chr2 118275771 118279322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02631 33 1017 Receptor kinase-like Gene Family AT3G47570 44.689 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi2g02631 Pkinase 3.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02631 - - gmx:100801459 1233.78