Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02630 ATGAAGTCCTTTTCTCTCTTGTCACCTATAATTTTATGCCTATGTCTGCTTTTTCTCTTTACCTTATGTTTTCTATCCTTTGGTCCAAACAAAATTGTGGCAGTGGCATTAGGAAATCAAACTGATCATTTGGCATTACTCAAATTCAAAGAATCAATATCCAGCGATCCTTATACAACTCTTGAATCTTGGAACTCTTCCATCCACTTCTGCATGTGGCCTGGAATCACATGCAGCCCCATGCATCAAAGAGTTATAGAGTTGAACTTAAAAGGATATGAGTTACATGGATCTTTATCTCCTCATGTTGGAAATCTCACTTTTCTGATATCTCTCAACCTTAGCAACAACAGCTTCTCTGGAGAAATTCCACAGGAGTTAGGTAAGTTGCTACAATTGCAACAACTTCGTCTCAACAATAACTCATTTGCAGGTCAAATTCCTACAAACTTGACATATTGCTCCGATCTCACGGACTTGTATTTACACAAGAACAATCTAATTGGCAAAATACCATTTGAAGTTGGCTCTTTGAAAAAGCTCCAATCATTTAGTGTTTGGCGAAACAGTTTAACCGGAGGAATCTCTTCCTTCATAGGGAATCTTTCAAGCTTAGCGCGTTTTTCATGTGATGATAACAACATACAAGGAGATATTCCACGAGAAATATGTCGCCTCAAAAACTTGTCATTTTTACTTTTGGGAGTGAACAAATTTTCTGGTACCATTCCTTCTTGTCTTTACAACATCTCATCACTTACTGTATTTTCTGTCACAGAGAATAACTTTCATGGCTCTCTTCCACTCAACATGTTCAACACCCTCCCCAATCTCCAAACTTTTTTCATTGGACAAAATCAATTTTCAGGCCCAATCCCTACTTCCATAATAAATGCATCTGCCATTATATGGTTTGATATTGGTACAAATTATTTTGTAGGACAAGTTCCAAGTTTAGGAAGGCTAGAACATTTACATTTTCTGAATTTGGAAGGCAACAATTTAGGTAGCAATTCAACTAAGGATTGGGAGTTCTTAAAAACTTTGACAAACTGTAGTGTGTTGTATGAGTTTTCTATTTGCTGTAATAACTTTGGAGGCATTCTACCAAGTTCTATAGGCAATTTATCCTCTGAGCTTGCAATACTAGATCTTGCAAATAATAGGATATCAGGAAATGTTCCTGCTGAATTAGGATCTCTAGTTGGCTTAATTAATTTGAACATGATCTATAACCAATTTGTAGGAAATATTCCAACTACTTTTGGGAAGTTTCGAGAGATGCAAAAGTTAATGTTGAGCGGAAACAAGTTTTCAGGAGATATACCGAAACTTATAGGGAACCTTAGTCAATTGTATTATTTAGATTTACATCTTAATATGTTTGAAGGAAATATTCCTCCAAGCATAGAAAACTGTCAAAAGTTACAATATCTAGATCTTTCGCATAATAAGCTTAGAGGAACCATCCCTTTAGAGGTTTTTAATCTTTTTTCCTTGTCAAATTTACTTGACTTGTCACATAACTCTTTGAGAGGTAGCTTACCAAGAGAAGTAGGTATGCTAAAAAATATCGGTTGGTTTGATGTCTCTGAGAATTGTTTATCAGGTGATATTCCTATAACTATAGGTAAATGCATAAGTTTAGAACACCTTCATTTGCAAGGGAACTCCTTCAACGGAACAATACCATCTTCTTTGGCTTCTCTCAGAGGTCTTCAATATTTAGACCTTTCAAGAAATCAATTGTCTGGATCGATCCCGGATGTTTTACAGAATATTCCTAGTTTAAAACACTTGAATATTTCTTTTAACATGTTGGAAGGTGTGGTACCAACTGACGGTGTCTTTGGAAATGCAACTCAAGTAGGATTGGTTGGAAACAAAAAGCTTTGTGGAGGTATTTCAAAGTTGCATCCACCGGCATGCCCTGTCAAGGATAGGAAACACACAAAACACAATAAATTCATGTTGGTAGTGATTAGTGTGGTTTCTTTTCTTGTCATACTTGCAGTTTTTATAACTATCTACTCGATGAGGAAAAGAAACCAGAAACGATCTTTTGATTCACCAACAATTGATCAACTAGATAAGGTTTCATACCAAGAGTTACATCAAGGAACAGATGGGTTCTCAACTAATAACTTGATCGGATCAGGAAGTTTTTGTTCTGTGTACAAAGGTAGTCTTGTGTCAGAAGATAATGTTGTTGCCATAAAGGTTTTGAACCTCAATAAGAAGGGAGCTCACAAAAGTTTTATTGCTGAATGCAATGCGCTCAAAAATATTAGACATCGAAACTTAGTTAAGATTATAACATGTTGTTCTAGTTCAGATTATAAAGGTCAAGAATTCAAAGCTTTAGTTTTTCATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCTGAAATTTTAAATGAAGAGCATCGAACAACATTGGACATCAGTCATAGATTAAACATCATTACTGATGTTGCTTCAGCATTACATTATCTTCATCAAGAATGTGAACAAGTGATCCTTCATTGTGACCTAAAGCCAAGTAATGTCCTTCTTGATGATGAGATGGTTGCTCATGTGGGTGATTTTGGCATAGCTAGACTTGTCTCGAACATTGGTGGTACCTCTCACAATGATACAAGTACAATCGGAATAAAAGGGACTGTTGGCTATACTCCTCCAGAGTATGGAATGGGCTCTGAAGTGTCTACATGCGGTGACATGTATAGTTTTGGAATCCTGATGTTGGAAATGCTTACTGGTAGAAGACCTACAGATGAATATTTTGAAGATGGCCAAAATCTGCGTGACTTTGTTGCAAACTCATTTCCTGATAATCTTATAAGGATTTTGGACCCAGGTATTGTATCAAGAGATACACAAGAAAAAATACAAGGTGAAATTTGTGAGAATCTTATTCCAGCGATTGACGAGGAGTGCTTAGTTTCACTTTTTAGAATTGGACTTATTTGTTCGACGGAACCACCAAACGAAAGAATGAATATTGTGGATGTGACTAAAGAGCTTAGCATAATCAGAAAAACTTTTTTCAAAGGTGAGATAAATTTATATTTTTATATGTTTATTTGA 3096 0.3576 MKSFSLLSPIILCLCLLFLFTLCFLSFGPNKIVAVALGNQTDHLALLKFKESISSDPYTTLESWNSSIHFCMWPGITCSPMHQRVIELNLKGYELHGSLSPHVGNLTFLISLNLSNNSFSGEIPQELGKLLQLQQLRLNNNSFAGQIPTNLTYCSDLTDLYLHKNNLIGKIPFEVGSLKKLQSFSVWRNSLTGGISSFIGNLSSLARFSCDDNNIQGDIPREICRLKNLSFLLLGVNKFSGTIPSCLYNISSLTVFSVTENNFHGSLPLNMFNTLPNLQTFFIGQNQFSGPIPTSIINASAIIWFDIGTNYFVGQVPSLGRLEHLHFLNLEGNNLGSNSTKDWEFLKTLTNCSVLYEFSICCNNFGGILPSSIGNLSSELAILDLANNRISGNVPAELGSLVGLINLNMIYNQFVGNIPTTFGKFREMQKLMLSGNKFSGDIPKLIGNLSQLYYLDLHLNMFEGNIPPSIENCQKLQYLDLSHNKLRGTIPLEVFNLFSLSNLLDLSHNSLRGSLPREVGMLKNIGWFDVSENCLSGDIPITIGKCISLEHLHLQGNSFNGTIPSSLASLRGLQYLDLSRNQLSGSIPDVLQNIPSLKHLNISFNMLEGVVPTDGVFGNATQVGLVGNKKLCGGISKLHPPACPVKDRKHTKHNKFMLVVISVVSFLVILAVFITIYSMRKRNQKRSFDSPTIDQLDKVSYQELHQGTDGFSTNNLIGSGSFCSVYKGSLVSEDNVVAIKVLNLNKKGAHKSFIAECNALKNIRHRNLVKIITCCSSSDYKGQEFKALVFHYMKNGSLEQWLHPEILNEEHRTTLDISHRLNIITDVASALHYLHQECEQVILHCDLKPSNVLLDDEMVAHVGDFGIARLVSNIGGTSHNDTSTIGIKGTVGYTPPEYGMGSEVSTCGDMYSFGILMLEMLTGRRPTDEYFEDGQNLRDFVANSFPDNLIRILDPGIVSRDTQEKIQGEICENLIPAIDEECLVSLFRIGLICSTEPPNERMNIVDVTKELSIIRKTFFKGEINLYFYMFI 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02630 1031 SUPERFAMILY L domain-like 352 633 - -
Vivi2g02630 1031 Gene3D Ribonuclease Inhibitor 41 154 IPR032675 -
Vivi2g02630 1031 Gene3D Phosphorylase Kinase; domain 1 692 792 - -
Vivi2g02630 1031 Pfam Leucine rich repeat 548 607 IPR001611 GO:0005515
Vivi2g02630 1031 Pfam Leucine rich repeat 427 486 IPR001611 GO:0005515
Vivi2g02630 1031 Gene3D Ribonuclease Inhibitor 155 318 IPR032675 -
Vivi2g02630 1031 ProSiteProfiles Protein kinase domain profile. 711 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02630 1031 SUPERFAMILY Protein kinase-like (PK-like) 687 1011 IPR011009 -
Vivi2g02630 1031 SUPERFAMILY L domain-like 40 335 - -
Vivi2g02630 1031 Pfam Protein kinase domain 712 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02630 1031 FunFam Leucine-rich repeat protein kinase family protein 199 340 - -
Vivi2g02630 1031 Gene3D Ribonuclease Inhibitor 320 652 IPR032675 -
Vivi2g02630 1031 FunFam LRR receptor-like serine/threonine-protein kinase EFR 341 649 - -
Vivi2g02630 1031 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 39 198 - -
Vivi2g02630 1031 SMART serkin_6 711 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02630 1031 ProSiteProfiles Leucine-rich repeat profile. 475 496 IPR001611 GO:0005515
Vivi2g02630 1031 PRINTS Leucine-rich repeat signature 570 583 - -
Vivi2g02630 1031 PRINTS Leucine-rich repeat signature 476 489 - -
Vivi2g02630 1031 SMART LRR_typ_2 570 593 IPR003591 -
Vivi2g02630 1031 SMART LRR_typ_2 474 497 IPR003591 -
Vivi2g02630 1031 SMART LRR_typ_2 106 130 IPR003591 -
Vivi2g02630 1031 SMART LRR_typ_2 449 473 IPR003591 -
Vivi2g02630 1031 SMART LRR_typ_2 594 619 IPR003591 -
Vivi2g02630 1031 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Vivi2g02630 1031 PANTHER RECEPTOR-LIKE PROTEIN 55 359 1015 - -
Vivi2g02630 1031 Gene3D Transferase(Phosphotransferase) domain 1 793 1023 - -
Vivi2g02630 1031 FunFam LRR receptor-like serine/threonine-protein kinase EFR 681 792 - -
Vivi2g02630 1031 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 793 1023 - -
Vivi2g02630 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02630 Vivi-Chr2 118189996 118193320 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02630 39 1021 Receptor kinase-like Gene Family AT3G47570 43.976 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi2g02630 Pkinase 4.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02630 - - gmx:102664380 1239.56