Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02624 ATGAAGCCTTACATTTTCTTGTTACCTATGTCTTGGTTTTTATGCCTTCATCTCTTTACCTTAACCTTAATGTATTTAGACTCAAACAAAACTGTGACAATGGCACTAGGAAACCAAACCGATCATTTGGCATTACTCCAATTCAAGCACTTGATATCTAGTGATCCATATGGTATCTTAGATTCTTGGAACAGTTCAACCCACTTTTGCAAATGGAATGGAATCATGTGTAGTCCCAAGCATCAAAGAGTAACAACATTGATGTTGCAAGGATACAATTTGCATGGTTCCATATCTCCATATATTGGCAATCTCTCTCATATGAGATTCCTCAACCTTGGAAACAACAGCTTCAACGGAAACATTCCACAAGAATTTGGTCGTTTGTCACGATTAAGGTTTCTCCTTCTACTCAACAACTCGTTGACTGGAGAATTTCCTATGAACTTGACAAAGTGCTCCGAGCTCAAAGGAATACAGTTAGCAGGAAACCATCTTATTGGAAAAATACCTAGTCAAATTGGTTCTCTTCAAAAGCTTCAAACTATTCTTATTGGGAGAAACAATTTTTCTGGAAAAATCCCACCTTCTGTAAGGAATCTGTCATCCCTTATTATTTTTGGGACTGGCTATAATAACTTGAAGGGAAATCTTCCACAAGAATTGTGCTACCTAAAACAGTTGAAGAGATTATCATTCTATGCCAACAAATTGTCTGGTACACTTCCTTCCTGTCTTTATAATATGTCATCTCTTACTTTTATCTCAGCTGGAGACAATAACTTTACTGGCTCTCTTCCATCCAATATGTTCCACACTCTCCCCAATCTCCAAAATTTTGGCATTGGACGGAATCAAATCTCAGGTTTGATCCCTATTTCCATTTCAAATGCTTCCACTTTGATATTATTTGATATAAGTACAAATCATTTTGTCGGACAAGTTCCAAATCTAGGGAAGATACAAAGTCTTTGGTGGCTGAATTTGGCTTACAACAATATTGGCGATAATTCAACAAATGATTTTGAATTTTTAAATTCAATGACAAACTCTAGTAATTTGGAAATACTCTCTCTATCCGATAATAATTTTGGAGGTAGTTTTGAAAATTATATAGGAAATTTATCCGTTGTACTTAGTGAATTTTATATTGGAGGTAATCAAATATATGGACAAATTCCTCTAGAATTAGGAAATCTAATTAGCTTGAGTCTCTTATCCATGGAATATAACTTTTTGGAAGGAAAGATTCCAATTACTTTTGGGAAGTTTCAAAAGATACAATTTCTAGGTTTGGGTGGAAACAGATTATCAGGGGATATACCAGCATCCATAGGCAATCTCAGTCAATTGTATCATTTGGAACTTCAAGAAAATATGTTAGAAGGATATATTCCTCCAAATATTGGAAATTGTAAAATGTTGCAATACTTGCGCCTTTCACAAAACAACCTGACCGGAGTCATACCACCAGAGGTTTTTAGTATTCTGTCTTTGACAAATTTATTGGATTTGTCACTAAACTCACTGAGTGGTAGCTTACCGAAAGAAGTGGGCCTGCTAAAAAATATCAATAATCTAGACGTCTCTGAAAATCATTTGTCTGGTGACATTCCTGAAACTATTGGTGAATGTTCAAGCTTAGAATATCTCCAATTGCAAGGAAACTCCTTCAATGGAACACTACCGTCTTCTTTGGCTTCTCTCAAAGGTCTTCGATATTTAGACCTTTCAAGTAATCAATTGTATGGAGCAATTCCTGAAGTTATGCAGAATATCTCCGGCTTGGAATACTTGAATGTTTCTTTTAACATGCTGGAAGGTCAGGTGCCAACAGACGGTGTCTTTGGAAATGCAACCCAAATAGCATTGATTGGAAACAGTAAAGTTTGTGGAGGTATTTCCAAACTGCATCTACCACCATGCCCTATCAAGAGTGAGAAGCACACAAAACACCATAAACTCAGATTAGTAGCAGTGATAGTTAGTGTGGTTTCTTTTCTTATACTGTCATTTATTATAACTATCTACTTCATGAAGAAAAGAAACAAAAAACAACCATCTGATTCACCAACAACTGACCACCTAGCTAAGGTTTCGTACCAAGAATTATATCAAGGAACTGATGGATTCTCGACTAGAAACTTCGTCGGATCAGGAAGTTTTGGTTCTGTGTACAAAGGAAATCTTGTGTCTGAAGATAATGTTGTTGCCATAAAGGTCTTGAACCTCCAAAAGAAAGGAGCACACAAAAGTTTCATTGTTGAATGTAATGTACTCAAAAACATTAGACACCGGAATTTAGTTAAGATTTTAACATGTTGTTCTGGTACGGATTACAAGAATCAAGAATTTAAAGCTCTAGTTTTTGAGTACATGAAAAAAGGAAGCTTAGAACAGTGGTTGCATCCCGAGATTTTAAATGCCGAGCATCCAATAACATTGGACCTTGGTCATAGATTAAACATCATTATCGATGTTGCTTCTGCGTTACATTATCTTCATCAGGAATGCGAACAATTGGTCATTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGATGAAGACATGGTTGCTCATGTGGGTGATTTTGGCATATCAAGACTTGTCTCAGCCATTGGTGGTACATCTCAGTCAAATACTAGCACAATTGGAATCAAAGGAACCATTGGTTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAGTGTCTACATGTGGTGACATGTATAGCTTTGGAATTCTTATGTTAGAAATGCTTACGGGCAGAAGACCCACTGATGAAGTTCTGGAAAATGGTCAAAATCTGCATGAATTTGTCGCAATTTCATTTCCTGATAATCTTATAAAGATTTTGGATATAAGTCTTGTATCAAGAGATGCAGAAGTTGAAACACCAGATCGACACCATGACAATCTCCTTCAAACTTTAGATGGGTGCTTATTTTCACTCTTTAGGATTGGACTTATTTGCTCAATGGAATCACCAAAAGAAAGAATGAGTATTGTGGAAGTCACTAGAGAGCTTAGCATAATCAAAAAAGCTTTTCTCACTGGTGTTAGACACTCATAA 3075 0.3633 MKPYIFLLPMSWFLCLHLFTLTLMYLDSNKTVTMALGNQTDHLALLQFKHLISSDPYGILDSWNSSTHFCKWNGIMCSPKHQRVTTLMLQGYNLHGSISPYIGNLSHMRFLNLGNNSFNGNIPQEFGRLSRLRFLLLLNNSLTGEFPMNLTKCSELKGIQLAGNHLIGKIPSQIGSLQKLQTILIGRNNFSGKIPPSVRNLSSLIIFGTGYNNLKGNLPQELCYLKQLKRLSFYANKLSGTLPSCLYNMSSLTFISAGDNNFTGSLPSNMFHTLPNLQNFGIGRNQISGLIPISISNASTLILFDISTNHFVGQVPNLGKIQSLWWLNLAYNNIGDNSTNDFEFLNSMTNSSNLEILSLSDNNFGGSFENYIGNLSVVLSEFYIGGNQIYGQIPLELGNLISLSLLSMEYNFLEGKIPITFGKFQKIQFLGLGGNRLSGDIPASIGNLSQLYHLELQENMLEGYIPPNIGNCKMLQYLRLSQNNLTGVIPPEVFSILSLTNLLDLSLNSLSGSLPKEVGLLKNINNLDVSENHLSGDIPETIGECSSLEYLQLQGNSFNGTLPSSLASLKGLRYLDLSSNQLYGAIPEVMQNISGLEYLNVSFNMLEGQVPTDGVFGNATQIALIGNSKVCGGISKLHLPPCPIKSEKHTKHHKLRLVAVIVSVVSFLILSFIITIYFMKKRNKKQPSDSPTTDHLAKVSYQELYQGTDGFSTRNFVGSGSFGSVYKGNLVSEDNVVAIKVLNLQKKGAHKSFIVECNVLKNIRHRNLVKILTCCSGTDYKNQEFKALVFEYMKKGSLEQWLHPEILNAEHPITLDLGHRLNIIIDVASALHYLHQECEQLVIHCDLKPSNVLLDEDMVAHVGDFGISRLVSAIGGTSQSNTSTIGIKGTIGYAPPEYGMGSEVSTCGDMYSFGILMLEMLTGRRPTDEVLENGQNLHEFVAISFPDNLIKILDISLVSRDAEVETPDRHHDNLLQTLDGCLFSLFRIGLICSMESPKERMSIVEVTRELSIIKKAFLTGVRHS 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02624 1024 SUPERFAMILY L domain-like 380 632 - -
Vivi2g02624 1024 Pfam Protein kinase domain 714 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02624 1024 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 78 344 - -
Vivi2g02624 1024 FunFam LRR receptor-like serine/threonine-protein kinase EFR 345 648 - -
Vivi2g02624 1024 ProSiteProfiles Protein kinase domain profile. 711 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02624 1024 SMART serkin_6 711 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02624 1024 SUPERFAMILY L domain-like 39 334 - -
Vivi2g02624 1024 SUPERFAMILY Protein kinase-like (PK-like) 685 1011 IPR011009 -
Vivi2g02624 1024 Gene3D Phosphorylase Kinase; domain 1 673 792 - -
Vivi2g02624 1024 Gene3D Ribonuclease Inhibitor 335 643 IPR032675 -
Vivi2g02624 1024 Gene3D Transferase(Phosphotransferase) domain 1 793 1019 - -
Vivi2g02624 1024 SMART LRR_sd22_2 225 251 - -
Vivi2g02624 1024 SMART LRR_sd22_2 351 377 - -
Vivi2g02624 1024 SMART LRR_sd22_2 569 595 - -
Vivi2g02624 1024 SMART LRR_sd22_2 424 450 - -
Vivi2g02624 1024 SMART LRR_sd22_2 937 957 - -
Vivi2g02624 1024 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 793 1022 - -
Vivi2g02624 1024 PANTHER OS04G0122200 PROTEIN 225 1015 - -
Vivi2g02624 1024 FunFam LRR receptor-like serine/threonine-protein kinase EFR 681 792 - -
Vivi2g02624 1024 Gene3D Ribonuclease Inhibitor 158 271 IPR032675 -
Vivi2g02624 1024 Pfam Leucine rich repeat N-terminal domain 39 78 IPR013210 -
Vivi2g02624 1024 ProSitePatterns Protein kinases ATP-binding region signature. 717 740 IPR017441 GO:0005524
Vivi2g02624 1024 Gene3D Ribonuclease Inhibitor 40 155 IPR032675 -
Vivi2g02624 1024 Gene3D Ribonuclease Inhibitor 272 321 IPR032675 -
Vivi2g02624 1024 Pfam Leucine rich repeat 547 606 IPR001611 GO:0005515
Vivi2g02624 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02624 Vivi-Chr2 117866609 117870255 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02624 33 1024 Receptor kinase-like Gene Family AT3G47570 44.024 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi2g02624 Pkinase 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02624 - - gmx:100785561 1255.35