Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02615 ATGTTGGATCTAGTATTTAAATCCATATTGAAAGAGAAGAAAGAACCATGCTTCTGTATTCCCCAAATATCATTATCAAACACCCTCTTGCTCTTGAACCAAATGAAGCCTTACATTTTCTTGTTACCTATGTCTTGGTATTTCTACTTTCACTTCTTTACCTTAACCGTAATGTATTTAGACTCAAACAAAACTGTGACAATGGCACTAGGAAACCAAACCGATCATTTGGCATTACTCCAATTCAAGCACTTGATATCTAGTGATCCATATGGTATCTTAGATTCTTGGAACAGTTCAACCCACTTTTGCAAATGGAATGGAATCATGTGTAGTCCCAAGCATCAAAGAGTAACAACCTTGATGTTGCAAGGATACAATTTGCATGGATCTATATCTCCATATATTGGCAATCTCTCTCATATCAGATTCCTCAACCTTGGAAACAACAGCTTCAACGGAAACATTCCACAAGAATTCGGTCGTTTGTCACGGTTAAGGTTTCTTCTTCTAGCTAACAACTCGTTGGCAGGAGAATTTCCTATAAACTTGACAAAGTGCTATGAGCTCAAAAGCTTAGTCTTAAGGGGAAATAATCTGATTGGAAAAATACCTAGTCAAATTGGTTCTCTTCAAAAGCTTCAAAATATTCTTATTGATAAAAACAATTTTTCTGGAAAAATCCCACCTTCTGTAAGGAATCTGTCGTCCGTAATTCTTTTTGGGACTGGCTATAATAACTTGAAGGGAAATCTTCCTCAAGAATTGTGCTACCTAAAACATTTGAAGTTCTTATCAATGCATGCCAACAAATTATCTGGTACACTTCCTTCTTGTCTGTATAATATGTCATCTCTTACTTTGATCTCAGCTGCAGTAAATAACTTTACTGGCTCTCTTCCATCCAATATGTTCCACACCCTCCCCAATCTTAAAAGCTTTGGAATTGCAAAGAATCAAATCTCAGGTTTAATCCCTATTTCCATTTCAAATGCTTCTACATTGACTGTATTTGATATAAGTAAAAATCATTTTGTCGGACAAGTTCCAACTCTAGGGAAGATACAAGGTCTTCGTTTTCTGAATTTGGCTCTCAACAATATCGGCGACAATTCAACAAAAGATTTGGAGTTTTTGAATTCATTGACAAACTCTAGTAATTTGGAAACACTCATTGTATCTTATAATAATTTTGGAGGTAGCTTGGAAAAGTCTATAGGAAATTTATCCACCGTACTTAGTCGATTTGTTATTGGAGGTAACCAAATATATGGACGAATTCCAATAGAATTAGGAAATCTGATTAGCTTGAGTCTCTTAGCCATGGAAAATAACCATTTGGAAGGAACAATTCCAACTACTTTTGGGAAGTTTCAAAAGATACAATTGCTAAGTTTGGCTGGAAACAGATTATCAGGGGATATACCAGTATTCATAGGTAATCTCAGTCAGCTGTATCAATTGGAACTAGAAGAAAATATGTTAGAAGGATATATTCCTCCTAGTATTGGAAATTGTCAAATGTTGCAATACTTAACCCTTTCACAAAACAACCTGACAGGAGTCATACCATCAGAGATTTTTAGTATTCCGTCTTTGACAAATTTATTGAATTTGTCACTAAACTCACTGAGTGGTAGCTTACCGAAAGAAGTGGGAATGCTAAAAAATATCAATGATCTAGATGTCTCTATGAATCATTTGTCGGGTGACATTCCTGAAACTATTGGTCAATGTTCAAGCTTAGAAAATCTTCGATTGCAAGGAAATTCCTTCAATGGAACAATACCATCTTCTTTGGCTTCTCTCAAAGGTCTTCGATATTTAGACCTTTCAAGTAATCAATTGTATGGAGCAATTCCTGAAGTTATGCAGAATATCTCCGGCTTGGAATACTTGAATGTTTCTTTTAACATGTTGGAAGGTGAGGTGCCAACAGATGGTGTCTTTGGAAATGCAACCCAAATAGCATTGATTGGAAACATTAAACTTTGCGGAGGTATTTCAAAACTGCATCTACCACCATGCCCTATCAAGAGTGAGAAGCACACAAAACACCATAAACTCAGATTAGTAGCAGTGATAGTTAGTGTGGTTTCTTTTCTTATACTGTCATTTATTATAACTATCTACTTCATGAAGAAAAGAAACAAAAAACAACCATCTGATTCACCAACAACTGACCACCAAGCTAAGGTTTCGTACCAAGAATTATATCAAGGAACTGATGGATTCTCGACTAAAAACTTGGTTGGATCAGGAAGTTTTGGTTCTGTGTACAAAGGAAATCTTGTGTCTGAAGATAATGTTGTTGCCGTAAAGGTCTTGAACCTCCAAAAGAAAGGAGCACACAAAAGTTTCATTGTTGAATGTAATGCACTAAAAAACATTAGACACCGGAACTTAGTTAAGATTTTAACATGTTGTTCTGGTACGGATTACAAGAATCAAGAATTTAAAGCTCTAGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAGTGGTTGCATCCCGAGATTTTAAATGCAGAGCATCCAATAACATTGGACCTTGGTCATAGATTAAACATTATTATCGATGTTGCTTCTGCATTACATTATCTTCATCAGGAATGTGAGCAATTGGTCCTTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGATGATGACATGGTTGCTCATGTGGGTGATTTTGGCATAGCAAAACTTGTCTCAACCATTGATGGTAAATCTCATTCAAATACTAGCACAATTGGAATCAAAGGAACCATTGGTTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAGCGTCCACATGTGGTGACATGTATAGCTTTGGAATTCTTGTGTTGGAAATGCTTACGGGTAGAAGACCCACTGACGAAGTTTTGGAAGATGGTCAAAATCTGCATGAATTTGTTGCAATTTCATTTCCTGATAATCTTATAAAGGTTTTGGATAAAAATCTTGTATCAAGAGATGCAGAAGTAGAAACACAAGATCGAAATCACGACAATCTCCTTCAAACTTTAGATGGGTGCTTATTTTCACTCTTTAGGATTGGACTTATTTGCTCAAGGGAATCACCAAAAGAAAGAATGAGTATTGTGGAAGTCACTAGAGAGCTTAGCATAATCAAAAAGGCCTTTTTCAATGGTGTTGACACCCATAATCAGGTGTAA 3186 0.3606 MLDLVFKSILKEKKEPCFCIPQISLSNTLLLLNQMKPYIFLLPMSWYFYFHFFTLTVMYLDSNKTVTMALGNQTDHLALLQFKHLISSDPYGILDSWNSSTHFCKWNGIMCSPKHQRVTTLMLQGYNLHGSISPYIGNLSHIRFLNLGNNSFNGNIPQEFGRLSRLRFLLLANNSLAGEFPINLTKCYELKSLVLRGNNLIGKIPSQIGSLQKLQNILIDKNNFSGKIPPSVRNLSSVILFGTGYNNLKGNLPQELCYLKHLKFLSMHANKLSGTLPSCLYNMSSLTLISAAVNNFTGSLPSNMFHTLPNLKSFGIAKNQISGLIPISISNASTLTVFDISKNHFVGQVPTLGKIQGLRFLNLALNNIGDNSTKDLEFLNSLTNSSNLETLIVSYNNFGGSLEKSIGNLSTVLSRFVIGGNQIYGRIPIELGNLISLSLLAMENNHLEGTIPTTFGKFQKIQLLSLAGNRLSGDIPVFIGNLSQLYQLELEENMLEGYIPPSIGNCQMLQYLTLSQNNLTGVIPSEIFSIPSLTNLLNLSLNSLSGSLPKEVGMLKNINDLDVSMNHLSGDIPETIGQCSSLENLRLQGNSFNGTIPSSLASLKGLRYLDLSSNQLYGAIPEVMQNISGLEYLNVSFNMLEGEVPTDGVFGNATQIALIGNIKLCGGISKLHLPPCPIKSEKHTKHHKLRLVAVIVSVVSFLILSFIITIYFMKKRNKKQPSDSPTTDHQAKVSYQELYQGTDGFSTKNLVGSGSFGSVYKGNLVSEDNVVAVKVLNLQKKGAHKSFIVECNALKNIRHRNLVKILTCCSGTDYKNQEFKALVFDYMKNGSLEQWLHPEILNAEHPITLDLGHRLNIIIDVASALHYLHQECEQLVLHCDLKPSNVLLDDDMVAHVGDFGIAKLVSTIDGKSHSNTSTIGIKGTIGYAPPEYGMGSEASTCGDMYSFGILVLEMLTGRRPTDEVLEDGQNLHEFVAISFPDNLIKVLDKNLVSRDAEVETQDRNHDNLLQTLDGCLFSLFRIGLICSRESPKERMSIVEVTRELSIIKKAFFNGVDTHNQV 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02615 1061 Pfam Leucine rich repeat N-terminal domain 73 112 IPR013210 -
Vivi2g02615 1061 Gene3D Ribonuclease Inhibitor 355 685 IPR032675 -
Vivi2g02615 1061 ProSitePatterns Protein kinases ATP-binding region signature. 751 774 IPR017441 GO:0005524
Vivi2g02615 1061 Pfam Leucine rich repeat 581 640 IPR001611 GO:0005515
Vivi2g02615 1061 SMART serkin_6 745 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02615 1061 ProSitePatterns Serine/Threonine protein kinases active-site signature. 876 888 IPR008271 GO:0004672|GO:0006468
Vivi2g02615 1061 PANTHER OS04G0122200 PROTEIN 259 1049 - -
Vivi2g02615 1061 ProSiteProfiles Protein kinase domain profile. 745 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02615 1061 SUPERFAMILY L domain-like 73 368 - -
Vivi2g02615 1061 FunFam LRR receptor-like serine/threonine-protein kinase EFR 378 682 - -
Vivi2g02615 1061 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 112 377 - -
Vivi2g02615 1061 Gene3D Phosphorylase Kinase; domain 1 707 826 - -
Vivi2g02615 1061 Gene3D Transferase(Phosphotransferase) domain 1 827 1057 - -
Vivi2g02615 1061 Gene3D Ribonuclease Inhibitor 185 238 IPR032675 -
Vivi2g02615 1061 Gene3D Ribonuclease Inhibitor 239 305 IPR032675 -
Vivi2g02615 1061 Gene3D Ribonuclease Inhibitor 74 184 IPR032675 -
Vivi2g02615 1061 Gene3D Ribonuclease Inhibitor 306 354 IPR032675 -
Vivi2g02615 1061 SUPERFAMILY Protein kinase-like (PK-like) 719 1045 IPR011009 -
Vivi2g02615 1061 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 827 1056 - -
Vivi2g02615 1061 FunFam LRR receptor-like serine/threonine-protein kinase EFR 715 826 - -
Vivi2g02615 1061 Pfam Protein kinase domain 746 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02615 1061 SUPERFAMILY L domain-like 381 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02615 Vivi-Chr2 117730404 117734318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02615 67 1057 Receptor kinase-like Gene Family AT3G47570 44.965 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi2g02615 Pkinase 1.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02615 - - gmx:100785561 1271.91