Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02611 ATGAACAACACTAACGAAGATGTTTCCGCACAAGATCTCGAACTTCAAAGCGATCACAGCTCCGATTACTTAGCTCAGCCTCAACCCCGCCGTCTGCGCGGCTTCGCTGCCACGGCGGCGGGGACCAATTCCACCGGAAAGGGGAAAAAGGAGAGAGAGAAAGAAAAGGAACGCACGAAGCTCCGGGAGCGACACCGGCGAGCCATCACCAGCCGAATGTTGGCTGGTCTACGTCAGTATGGTAATTTCCCTCTTCCGGCGCGTGCTGACATGAACGACGTACTCGCTGCTCTCGCGCGTGAAGCTGGTTGGATTGTTAAGGCCGATGGAACTACATACCGCCAGAGCATACCTCCTTCTCAAATGGGATCATTTGCGGCAAGGTCAGTTGATAGTCAACTATCTGGTGGTTCCTTGAGAACTTGTTCAGTTAAGGAAACGCTAGAGAATCAGCCACCAGTACTTCGAATTGATGAATGCTTGTCTCCTGCATCTATTGATTCTGTTGTAATTGCAGAAAGAGACCCAAAGAACGGAACATATGCAAGTGTAAGCCCCATCAATTCAGTTGACTGCTTGGAGGCTGATCAGCTTATGCAAGATATTCATTCCGGGGTGCATGAAAGTGACTTCAATTGTACACCTTATGTCCCTGTTTATATAAAACTTCCAGCTGGTATTATCAATAAATTTTGCCAGTTGATGGATCCCGAAGGCATTAGGCAAGAGCTAATCCATATTAAGTCCTTAAATGTCGATGGTGTTGTTGTGGATTGTTGGTGGGGCATTGTTGAAGGCTGGAGCCCTCAGAAATATGTGTGGTCTGGTTATAGGGAGCTTTTTAACATTATTAGAGAATTCAAGCTGAATTTGCAGGTTGTTATGGCATTTTATGAATGTGGAGGGAATGATTCTAGTGATGCATTGATTTCCCTTCCACAATGGGTTTTGGATATTGGAAAAGACAACCAGGACATATTTTTCACAGATCGTGAAGGACGGAGAAATACTGAATGCTTATCTTGGGGGATCGACAAAGAGCGGGTTCTCAAAGGAAGAACTGGAATTGAGGTTTATTTTGATATGATGAGAAGCTTTCGGACAGAGTTTGATGACCTGTTTACAGAAGGTTTAATTTATGCTGTAGAAGTTGGACTTGGAGCATCTGGGGAGCTGAAATACCCTTCTTTTTCAGAAAGGATGGGGTGGAGGTATCCTGGTATTGGTGAGTTTCAGTGCTACGATAAATACCTGCAACATAGTCTGCGCACAGCAGCCAAACTACGTGGTCACTCTTTCTGGGCAAGAGGACCTGATAATGCTGGGCACTACAACTCTATGCCACACGAGACTGGATTTTTTTGTGAACGAGGTGATTATGACAACTATTATGGACGCTTCTTCTTACATTGGTACTCCCAGACTTTAATAGACCATGCGGATAATGTTTTGTCTCTTGCAAGCCTTGCTTTTGAGGAAACAAAAATTATTGTCAAGGTTCCTGCTGTACATTGGTGGTACAAGACTCCTAGTCATGCAGCAGAATTGACAGCAGGATATCACAACCCTACAAATCAGGATGGCTACTCTCCGGTGTTTGAGGTTCTGAAAAAATACGCTGTCACCATGAAATTTGTGTGCTTAGGATTTAATCTTTCCGACCAGAAGGCTAATGACTCATTGGTAGATCCAGAGGGATTGAGTTGGCAGGTATTAAACTCCGCTTGGGAACGAGGGTTGGTCACTGCTGGAGAGAACACACTCTTTTGCTATGATAGAGAAAGGTACCAGAGATTGGTTGACATGGCAAAGCCCAGAAATGATCCTGATCAGCGGCATTTTTCGTTCTTTGTTCATCAGCAACCCTCTCTACTTCAGGGGAATGTTTGCTTGCCGGAATTGGATTTCTTCATCAAATGCATGCATGGGGAGATGACAGGGGATCTATAA 1950 0.4492 MNNTNEDVSAQDLELQSDHSSDYLAQPQPRRLRGFAATAAGTNSTGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWIVKADGTTYRQSIPPSQMGSFAARSVDSQLSGGSLRTCSVKETLENQPPVLRIDECLSPASIDSVVIAERDPKNGTYASVSPINSVDCLEADQLMQDIHSGVHESDFNCTPYVPVYIKLPAGIINKFCQLMDPEGIRQELIHIKSLNVDGVVVDCWWGIVEGWSPQKYVWSGYRELFNIIREFKLNLQVVMAFYECGGNDSSDALISLPQWVLDIGKDNQDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMMRSFRTEFDDLFTEGLIYAVEVGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQHSLRTAAKLRGHSFWARGPDNAGHYNSMPHETGFFCERGDYDNYYGRFFLHWYSQTLIDHADNVLSLASLAFEETKIIVKVPAVHWWYKTPSHAAELTAGYHNPTNQDGYSPVFEVLKKYAVTMKFVCLGFNLSDQKANDSLVDPEGLSWQVLNSAWERGLVTAGENTLFCYDRERYQRLVDMAKPRNDPDQRHFSFFVHQQPSLLQGNVCLPELDFFIKCMHGEMTGDL 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02611 649 Gene3D Glycosidases 207 648 - -
Vivi2g02611 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 529 552 IPR001554 GO:0000272|GO:0016161
Vivi2g02611 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 494 510 IPR001554 GO:0000272|GO:0016161
Vivi2g02611 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 511 522 IPR001554 GO:0000272|GO:0016161
Vivi2g02611 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 294 315 IPR001554 GO:0000272|GO:0016161
Vivi2g02611 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 567 589 IPR001554 GO:0000272|GO:0016161
Vivi2g02611 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 272 290 IPR001554 GO:0000272|GO:0016161
Vivi2g02611 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 460 479 IPR001554 GO:0000272|GO:0016161
Vivi2g02611 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 251 265 IPR001554 GO:0000272|GO:0016161
Vivi2g02611 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 387 409 IPR001554 GO:0000272|GO:0016161
Vivi2g02611 649 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 156 644 IPR001554 GO:0000272|GO:0016161
Vivi2g02611 649 MobiDBLite consensus disorder prediction 1 59 - -
Vivi2g02611 649 SUPERFAMILY (Trans)glycosidases 211 645 IPR017853 -
Vivi2g02611 649 Pfam Glycosyl hydrolase family 14 233 608 IPR001554 GO:0000272|GO:0016161
Vivi2g02611 649 Pfam BES1/BZR1 plant transcription factor, N-terminal 46 193 IPR008540 -
Vivi2g02611 649 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02611 Vivi-Chr2 117661277 117666861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02611 59 645 Glycoside Hydrolase AT5G45300 70.628 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vivi2g02611 Glyco_hydro_14 5.5e-86 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02611 K01177 - gmx:100777004 1167.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02611 2 117661277 117666861 Vivi2g02611 2 117661277 117666861 ECH