Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g02610 | ATGGGGTCTAGTAGTAGTAAAGGTGCTTCTTCTTGTAGTTCATCTTCTTCTTCTTGTAGTTTACGGAAGAATCGATCCAAGAGGCTTAGAGGTTTTCCTTCTTATTGTCTTGGAACAACTTCTGGATCTCGTGACAGTGATAATGATGAACGGGTTTGTGATCAGAGTAAAGTAAATGGAAGTGATGTTACATATACCAGCAGCAATGAAATTGACTCAGATGAATCGAAATCGGAGTCTTTTAGAAAAGTTAAACCGGATGAAATACCTTGTATGCCTTCTAACATTGATCTTGATGAGTGGAGTCGCACTGAATCCAGAACCGCGAGCATCTCGGCTCACGGTTCTTCAACTCAGTCTACAAATTCTGCGAGTCGGTTCCTTTCTCGGTTTAGCCTCATTCCGGGTAATATAAGCTTCAGACTCAGCAGAACCACGAGCTTAGGGTCATCTCGACCTTGTCCTGATTCTTCGGCAAGTCTTTCTATGTTTAACAATGATGAAGACGAGCTTAGTCTGCATAATAGAAATGAAACTCAACAATATAGTGGCAGCGACTTGCTTAACGGGTCTTTTGTAAATCCAGTCCCTATACAGCATCACGGAGATGCTTCTAATAATTCAAGTTCGAATGTCCCGATATTCGGTTTGGGTAGCAACTTATCGAGCAGTCCTACGTTGTCTCCTCTCGAAGATACGGTTAGAGATGGATATGACCCACGAGAGATGTCTGGTATGAACATGTTTTCTCCGAGAGTTAATACCGAGGCAGGAAATGTTACGGATAGACGGAATGGAGCTCGTGAACCTGTTGACCGCAATGTTCGTTTCAGCCGAACTTTAAGCGTTGGGAGGCTTCGTGACAGAGTGCACCGCCGATCAGGATTGGCTGACTTCACCTTTTGCCCTCTGCAACAAGAGAGAGATGCTAGCGAGGATAGTGGAAGACAAGTAGGGGAGAGGGGTGCAGGAGTGTCACCATCTGATCGAAACGCTTTAAATTCTCTTACTGCATCCGGTTATCCTCTGCCTAATAGGTCTAGCTCTCCATTCAGAACCCAAGACCACGAGGTTGAGGCTTCACGGTCAAGAGAAACTAGGTATCAGGATCTACTAGAACATAGGTCCAATTTCCTCGAACGGAGAAGAAGAATACGATCTCAGGTTCGTGCTCTTCAGAGGTTGGGTAGCCGGTTTGAAAATCTTTCTGGACATGACAGATCATGTATCTTGTCTGGTCAACATAGAAACGGTCGTTGTACATGCAGAATAAATAGTCGCGATAACAATTCAAATTCAAACGATGATACAAATGCTAGAGCTAGCATATCAAGAATAGTGATGTTAGCTGAAGCCTTATTCGAGGTTCTGGATGAAATTCACCAGCAATCAGTGGTTTTATCTTCCCGCCCTTCTGTATCTTCTATCGGATCTGTTCCCGCGCCTGCTGAAGTTGTCGAATCCTTACCTGTTAAACTATACACAAAGCCACACAAACATCAAGAAGAACCTGTACAATGCTATATATGTCTTGTGGAGTATGAAGATGGTGACAGCATGCGAGTACTTCCTTGCCATCATGAATTTCATACGACATGTATAGACAAGTGGCTGAAGGAGATTCACAGGGTATGTCCACTATGTCGAGGAGATATTTGTATATCAGATTCACTCCCAACAGAAAACTAA | 1689 | 0.4358 | MGSSSSKGASSCSSSSSSCSLRKNRSKRLRGFPSYCLGTTSGSRDSDNDERVCDQSKVNGSDVTYTSSNEIDSDESKSESFRKVKPDEIPCMPSNIDLDEWSRTESRTASISAHGSSTQSTNSASRFLSRFSLIPGNISFRLSRTTSLGSSRPCPDSSASLSMFNNDEDELSLHNRNETQQYSGSDLLNGSFVNPVPIQHHGDASNNSSSNVPIFGLGSNLSSSPTLSPLEDTVRDGYDPREMSGMNMFSPRVNTEAGNVTDRRNGAREPVDRNVRFSRTLSVGRLRDRVHRRSGLADFTFCPLQQERDASEDSGRQVGERGAGVSPSDRNALNSLTASGYPLPNRSSSPFRTQDHEVEASRSRETRYQDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGRCTCRINSRDNNSNSNDDTNARASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVSSIGSVPAPAEVVESLPVKLYTKPHKHQEEPVQCYICLVEYEDGDSMRVLPCHHEFHTTCIDKWLKEIHRVCPLCRGDICISDSLPTEN | 562 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g02610 | 562 | FunFam | Putative RING zinc finger domain superfamily protein | 476 | 554 | - | - | |
Vivi2g02610 | 562 | MobiDBLite | consensus disorder prediction | 57 | 71 | - | - | |
Vivi2g02610 | 562 | ProSiteProfiles | Zinc finger RING-type profile. | 507 | 549 | IPR001841 | - | |
Vivi2g02610 | 562 | MobiDBLite | consensus disorder prediction | 307 | 365 | - | - | |
Vivi2g02610 | 562 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Vivi2g02610 | 562 | MobiDBLite | consensus disorder prediction | 1 | 103 | - | - | |
Vivi2g02610 | 562 | SUPERFAMILY | RING/U-box | 487 | 555 | - | - | |
Vivi2g02610 | 562 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 470 | 553 | IPR013083 | - | |
Vivi2g02610 | 562 | Pfam | Ring finger domain | 506 | 549 | IPR001841 | - | |
Vivi2g02610 | 562 | MobiDBLite | consensus disorder prediction | 243 | 266 | - | - | |
Vivi2g02610 | 562 | SMART | ring_2 | 507 | 548 | IPR001841 | - | |
Vivi2g02610 | 562 | MobiDBLite | consensus disorder prediction | 328 | 351 | - | - | |
Vivi2g02610 | 562 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 561 | - | - | |
Vivi2g02610 | 562 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 19 | - | - | |
Vivi2g02610 | 562 | MobiDBLite | consensus disorder prediction | 72 | 86 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g02610 | Vivi-Chr2 | 117648726 | 117653512 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g02610 | 224 | 556 | C3H Transcription Factor Family | AT5G45290 | 59.770 | 2.19e-117 | 357 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g02610 | - | - | gmx:100786091 | 780.785 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vivi2g02610 | 2 | 117648726 | 117653512 | Vivi2g02610 | 2 | 117648726 | 117653512 | ECH |