Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02607 ATGGAGAGCATGAGATTAGGCCAATGGTTAAAGTTAAATCTTCTGGTGTTTGTACTGGTATTGCTGAAGGCAGAAGGAGGTTATGTGCCGATAACTTATGTCAAGAGCGCGGTAACAAAAGGAGCCGTTTGTTTGGATGGTAGTCCACCAGCTTACCATTTAGATAGAGGATTTGGAAAAGGAATTAACAGTTGGTTAGTTCAATTTGAGGGAGGAGGATGGTGCAACAATATCACTACATGCCTTGGGCGTAAGATGAACCGTTTAGGTTCATCTAAGCGGATGGCTAATCAAATTGCCTTTTCAGGAATTTTGAATAACAGGAGAATGTTCAATCCAGATTTCTACAATTGGAACAAAATCAAGGTTAGATATTGTGATGGTTCATCTTTTACTGGTGATGTGGAAGCTGTAAATCCGGTAACAAAGTTGCACTTCAGAGGAGCAAGAGTTTTTAATGCTGTCATGGAGGATTTGCTAGCAAAAGGAATGAAAAATGCTCAAAATGCTATTATTTCAGGATGTTCAGCTGGTGGTTTAACTTCAATACTTCATTGTGATCGCTTTCGAGCTCTTTTCCCGCTAGGTGCTAAAGTGAAATGCCTCTCAGATGCTGGTTACTTTATCAACGCAAGAGATGTATCTGGAACACAGCACATCGAAGAGTTCTTCGGTCAAATTGTAACAACACATGGATCTGCAAGGAATTTGCCGAGATCATGCACTTCGAGGCTCAGTCCAAGGCTGTGCTTTTTCCCTCAATATGTTGTATCACAAATCACTACACCTATTTTCTTTGTAAATGCGGCATACGACTCATGGCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTCAAGGACACTGGCATAGCTGCAAGATGGATATAAACAACTGCTCTTCTAATCAACTAGATCTAATGCAAGGCTTTAGAACACAATTTCTAAGGGCATTGACTGTTCTAGGAAACTCTCCATCCAAAGGAATGTTCATAGACTCTTGCTATGCTCACTGCCAAACAGAAATGCAAGAAACATGGTTTAGAAGTGATTCTCCATTATTGGCCAAAACAACCGTTGCGAAAGCTGTAGCAGATTGGTTTTATGAAAGAAGGCTTTTCCATCAAATTGACTGTCCTTACCCCTGCAATCCGAGTTGTCACAACCGCGTTTTTCAACAAGACAACCCTGGAAAAAATGTCACCACCAAAGGAACTTCATCAGATGCATCAGCTGTAAAGTCCAGTTTTCCAAAACTATCAAATAAGGCGCAATGGATTGAGCTTTTGTGCATTAGAACCGGTTGGCTTCTATTGACGACAGTTAGTCTGGTCATCCTATAA 1347 0.4098 MESMRLGQWLKLNLLVFVLVLLKAEGGYVPITYVKSAVTKGAVCLDGSPPAYHLDRGFGKGINSWLVQFEGGGWCNNITTCLGRKMNRLGSSKRMANQIAFSGILNNRRMFNPDFYNWNKIKVRYCDGSSFTGDVEAVNPVTKLHFRGARVFNAVMEDLLAKGMKNAQNAIISGCSAGGLTSILHCDRFRALFPLGAKVKCLSDAGYFINARDVSGTQHIEEFFGQIVTTHGSARNLPRSCTSRLSPRLCFFPQYVVSQITTPIFFVNAAYDSWQIKNILAPGVADPQGHWHSCKMDINNCSSNQLDLMQGFRTQFLRALTVLGNSPSKGMFIDSCYAHCQTEMQETWFRSDSPLLAKTTVAKAVADWFYERRLFHQIDCPYPCNPSCHNRVFQQDNPGKNVTTKGTSSDASAVKSSFPKLSNKAQWIELLCIRTGWLLLTTVSLVIL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02607 448 PANTHER NOTUM-RELATED 17 390 IPR004963 GO:0016787
Vivi2g02607 448 Pfam Pectinacetylesterase 23 373 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02607 Vivi-Chr2 117519584 117525028 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02607 5 393 Carbohydrate Esterase AT4G19420 62.264 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02607 K19882 - gmx:100776478 767.303