Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02605 ATGGTTAAAGTTAAATCTTCTGGTGTTTGTACTGGTATTGCTGAAGGCAGAAGGAGGTTATGTGCCGATAACTTATGTCAAGAGCGCGGTAACAAAAGGAGCCGGTTAGGAGTTTTTCCTTCTTTTTCTGTGTTTTGTTTGGATGGTAGTCCACCAGCTTACCATTTAGATAGAGGATTTGGAAAAGGAATTAACAGTTGGTTAGTTCAATTTGAGGGAGGAGGATGGTGCAACAATATCACTACATGCCTTGGGCGTAAGATGAACCGTTTAGGTTCATCTAAGCGGATGGCTAATCAAATTGCCTTTTCAGGAATTTTGAATAACAGGAGAATGTTCAATCCAGATTTCTACAATTGGAACAAAATCAAGGTTAGATATTGTGATGGTTCATCTTTTACTGGTGATGTGGAAGCTGTAAATCCGGTAACAAAGTTGCACTTCAGAGGAGCAAGAGTTTTTAATGCTGTCATGGAGGATTTGCTAGCAAAAGGAATGAAAAATGCTCAAAATGCTATTATTTCAGGATGTTCAGCTGGTGGTTTAACTTCAATACTTCATTGTGATCGCTTTCGAGCTCTTTTCCCGCTAGGTGCTAAAGTGAAATGCCTCTCAGATGCTGGTTACTTTATCAACGCAAGAGATGTATCTGGAACACAGCACATCGAAGAGTTCTTCGGTCAAATTGTAACAACACATGGATCTGCAAGGAATTTGCCGAGATCATGCACTTCGAGGCTCAGTCCAAGGCTGTGCTTTTTCCCTCAATATGTTGTATCACAAATCACTACACCTATTTTCTTTGTAAATGCGGCATACGACTCATGGCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTCAAGGACACTGGCATAGCTGCAAGATGGATATAAACAACTGCTCTTCTAATCAACTAGATCTAATGCAAGGCTTTAGAACACAATTTCTAAGGGCATTGACTGTTCTAGGAAACTCTCCATCCAAAGGAATGTTCATAGACTCTTGCTATGCTCACTGCCAAACAGAAATGCAAGAAACATGGTTTAGAAGTGATTCTCCATTATTGGCCAAAACAACCGTTGCGAAAGCTGTAGCAGATTGGTTTTATGAAAGAAGGCTTTTCCATCAAATTGACTGTCCTTACCCCTGCAATCCGAGTTGTCACAACCGCGTTTTTCAACAAGACAACCCTGGAAAAAATGTCACCACCAAAGGAACTTCATCAGATGCATCAGCTGTAAAGTCCAGTTTTCCAAAACTATCAAATAAGGCGCAATGGATTGAGCTTTTGTGCATTAGAACCGGTTGGCTTCTATTGACGACAGTTAGTCTGGTCATCCTATAA 1353 0.4072 MVKVKSSGVCTGIAEGRRRLCADNLCQERGNKRSRLGVFPSFSVFCLDGSPPAYHLDRGFGKGINSWLVQFEGGGWCNNITTCLGRKMNRLGSSKRMANQIAFSGILNNRRMFNPDFYNWNKIKVRYCDGSSFTGDVEAVNPVTKLHFRGARVFNAVMEDLLAKGMKNAQNAIISGCSAGGLTSILHCDRFRALFPLGAKVKCLSDAGYFINARDVSGTQHIEEFFGQIVTTHGSARNLPRSCTSRLSPRLCFFPQYVVSQITTPIFFVNAAYDSWQIKNILAPGVADPQGHWHSCKMDINNCSSNQLDLMQGFRTQFLRALTVLGNSPSKGMFIDSCYAHCQTEMQETWFRSDSPLLAKTTVAKAVADWFYERRLFHQIDCPYPCNPSCHNRVFQQDNPGKNVTTKGTSSDASAVKSSFPKLSNKAQWIELLCIRTGWLLLTTVSLVIL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02605 450 Pfam Pectinacetylesterase 45 375 IPR004963 GO:0016787
Vivi2g02605 450 PANTHER NOTUM-RELATED 44 392 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02605 Vivi-Chr2 117519580 117525028 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02605 46 395 Carbohydrate Esterase AT4G19420 63.377 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02605 K19882 - gmx:100776478 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02605 2 117519580 117525028 Vivi2g02605 2 117519580 117525028 ECH
Vivi2g02605 2 117519580 117525028 Vivi1g03316 1 72065438 72068893 PCT
Vivi1g03313 1 72013634 72015310 Vivi2g02605 2 117519580 117525028 PCT