Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02594 ATGAAGGAACCTTCAAAACCATGGAGACCATTCACATCAAATTGTTGCACAACAGAAAACCAAACAATTTTTAGTAACTTCAGTAAATGCAAACCTTCACGTTCAGATTATTCTAAGAATATTGCTCCATTGCCGTCTTTTAGGAGACTTTCTTTCTCTGATCTTAGCCGTTCGTCTTCGACGCGTATCAATGAAGATCTTGCACTGTCTTTTGGTTCTGACTTGTTTGATTTTCAGCTGAGTGAACTTCGCGCTATTACTCAGAATTTTTCGAGTAATTTTTTGCTTGGTGAAGGCGGGTTTGGAACAGTTCATAAGGGCTATTTCGATGATAATTTTAGACAAGGTTTGAAGGCTCAACCTGTTGCGGTTAAGCTTTTGGATATTGAAGGTTTACAAGGACATCGCGAATGGCTTGCAGAAGTGATTTTTCTTGGGCAGTTAAGGCATCCCAATTTGGTCAAATTGATTGGATATTGTTGTGAGGATGAAGAGAGACTACTTGTCTATGAATTCATGCCAAGAGGAAGCTTGGAGAATCACATGTTCAGAAGACTAACATCACTTCCATGGGCAACAAGAATAAAAATTGCAATTGGTGCTGCGAAAGGACTTTCTTTCTTGCATGGAGCTGAAAAACCGGTCATTTACAGAGATTTCAAGACTTCCAATGTCTTACTTGATTCAGACTTCACAGCAAAATTGTCGGATTTTGGACTTGCGAAAATGGGGCCAGAAGGATCGAAGTCACATGTTACAACAAGAGTTATGGGCACCTATGGATATGCAGCCCCAGAATACATCTCAACAGGACACTTGACTACAAAAAGCGATGTCTATAGCTTCGGAGTAGTCCTGCTAGAACTTCTAACAGGAAGAAGAGCAACAGACAAAACAAGACCAAAGACAGAACAAAACATTGTGGATTGGACAAAGCCATACTTGAGTAGCAGTAGAAGATTGAGGTACATTATGGATCCAAGGCTTGCTGGCCAATATTCCGTGAAAGGCTCAAAAGAGATAGCACATTTGGCATTACAATGCATAAGTTTACATCCTAAAGACAGACCAAGAATGGCAATGATTGTTGAAACACTTGAAAGCCTTCAACAGTTCAAGGATATGGCTGTTACTAGTGGACACTGGCCAATATCATCAAAAACTACTAAAAATGGAGCCTCTAATGTGAAAGCAAGAGCAAATGGTGCAAACCAGAAGCAATTGGCTCCAGTTAGGAGCAAAAAAACCTGA 1251 0.4013 MKEPSKPWRPFTSNCCTTENQTIFSNFSKCKPSRSDYSKNIAPLPSFRRLSFSDLSRSSSTRINEDLALSFGSDLFDFQLSELRAITQNFSSNFLLGEGGFGTVHKGYFDDNFRQGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEERLLVYEFMPRGSLENHMFRRLTSLPWATRIKIAIGAAKGLSFLHGAEKPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSKSHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRATDKTRPKTEQNIVDWTKPYLSSSRRLRYIMDPRLAGQYSVKGSKEIAHLALQCISLHPKDRPRMAMIVETLESLQQFKDMAVTSGHWPISSKTTKNGASNVKARANGANQKQLAPVRSKKT 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02594 416 MobiDBLite consensus disorder prediction 381 416 - -
Vivi2g02594 416 Gene3D Phosphorylase Kinase; domain 1 52 172 - -
Vivi2g02594 416 Gene3D Transferase(Phosphotransferase) domain 1 173 383 - -
Vivi2g02594 416 FunFam Serine/threonine-protein kinase BIK1 57 172 - -
Vivi2g02594 416 MobiDBLite consensus disorder prediction 381 410 - -
Vivi2g02594 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Vivi2g02594 416 CDD STKc_IRAK 96 369 - -
Vivi2g02594 416 PANTHER OS01G0588500 PROTEIN-RELATED 61 370 - -
Vivi2g02594 416 SUPERFAMILY Protein kinase-like (PK-like) 70 367 IPR011009 -
Vivi2g02594 416 FunFam Serine/threonine-protein kinase PBS1 173 381 - -
Vivi2g02594 416 Pfam Protein tyrosine and serine/threonine kinase 96 366 IPR001245 GO:0004672|GO:0006468
Vivi2g02594 416 ProSitePatterns Protein kinases ATP-binding region signature. 96 125 IPR017441 GO:0005524
Vivi2g02594 416 ProSiteProfiles Protein kinase domain profile. 90 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02594 Vivi-Chr2 117337606 117339776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02594 78 382 Glycoside Hydrolase AT3G07070 51.133 3.37e-102 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vivi2g02594 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02594 - - gmx:100814241 736.873