Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02592 ATGTGGAATCATGGCGACAACAACCCTGCAAGCTGTTCAAGGATGTCAGTGTCGGCTTCCTTTCCGGTATTGAAATGGCCATCCGACTATGCTTTTTATTTAGGATTGGTCCCCACTATTGGCTATGAGTGTAACTGTGTTATTGGAAGCAAATTCTTTGTTCTTGCAGCAAAACATGGAACTGTTATTCATGCTTGCAAACTGTTTGAGAAATTGCCTTATAGAGAGGTTGTGATATGGTCAAAGGTATTTAAGAACGTTGCTTGCTTTTGCTCAATTAATTTGGTTTCCTACTTCTTCCCATACTCTTTGCTTGTTGTTCGCTTGGTTTTCACTTTTCAAAATCACCAAGCTTGTCCTAATGTAGAGCTCATGAGCACTATTACGTTTTCACATGCTAAGGGTTCTCTTCAAATTTTCATTGACTTACAAGATACTCAAACAAAACATCAAGCAACACATCTCTCCACCAAAGAAAACAATATCGGAAATGCTGTTGCCGCTCTTATGGCAGATTTTGCTCCTAAGACAAAGGTTCTTAGAAATGGTAAATGGTGCGAGAAAGAAGCTCCAATCTTAGTTCCAGGTGATATCACTAGCATCAAACTTTGTGACATAATACCATTATATGCTCGTCTTCTAGAAGGTGATCTTTTAAAGGTTAACCAAGCAACATTAACAGGAAAATCACTTCCGGTCACTCGACATCCAGAACAAAAAGTTTTCTCATATTCAACTTGCAAACAAGGAGAAAATGAAGTCATTTTTATTGCAACCACTGTTCACACATTCATCAGAAGAGCAACACATTTGGTTGACAATATAAACAATGTTGGACAATTCCATATGGTTCTCAAATCAACTGAAAATTTTTGTACCTGTTCTATTACAGTTGTAATTTTGATTGGTAGAATTCCTATTATTATGACAACTATTTTATTTGTGTCAAGGGCTATTGGTTCTCATAAATTTTCTGAACAAGGTGCTACTACAAAAAGCATAATTGCCATTGAGGAAATAGCTGGTGTAGCCATTCTTGACAGTGGAAAGACAGAGACTTTTACATTTACCACATTGCTCATTGATATGGACTTGATTAAAGTTTTTATTAAGGGTATATATGGAACTTGTGATTCCTCTTGTTGCTAG 1149 0.3664 MWNHGDNNPASCSRMSVSASFPVLKWPSDYAFYLGLVPTIGYECNCVIGSKFFVLAAKHGTVIHACKLFEKLPYREVVIWSKVFKNVACFCSINLVSYFFPYSLLVVRLVFTFQNHQACPNVELMSTITFSHAKGSLQIFIDLQDTQTKHQATHLSTKENNIGNAVAALMADFAPKTKVLRNGKWCEKEAPILVPGDITSIKLCDIIPLYARLLEGDLLKVNQATLTGKSLPVTRHPEQKVFSYSTCKQGENEVIFIATTVHTFIRRATHLVDNINNVGQFHMVLKSTENFCTCSITVVILIGRIPIIMTTILFVSRAIGSHKFSEQGATTKSIIAIEEIAGVAILDSGKTETFTFTTLLIDMDLIKVFIKGIYGTCDSSCC 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02592 382 SUPERFAMILY Calcium ATPase, transduction domain A 175 272 IPR008250 -
Vivi2g02592 382 Gene3D - 359 372 IPR023299 GO:0000166
Vivi2g02592 382 Pfam E1-E2 ATPase 174 302 - -
Vivi2g02592 382 Gene3D - 157 343 - -
Vivi2g02592 382 PANTHER CALCIUM-TRANSPORTING ATPASE 157 373 - -
Vivi2g02592 382 Gene3D - 344 358 IPR023214 -
Vivi2g02592 382 Gene3D - 175 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02592 Vivi-Chr2 117320312 117321460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02592 175 373 Primary Pumps ATPases AT2G18960 56.696 2.33e-73 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02592 K01535 - vvo:131649854 770.77