Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02589 ATGGGCATTTGTCTGATAAAAGGCCAATGGCTGTGGCTTCTGTATGTTTTGCTGATGCATATTGTAATTGTAATTAATAACATTGAAGCGATCAGTCCTGATGGCGAGGCACTTGTCAGCTTCAGGACAACAATTATTAGCTCTGATGGTATCCTGGTTCAGTGGAGGCCTGAGGATCCTGACCCATGTAAATGGAAAGGAGTGAAGTGTGATCTAAAAACCAAGAGAGTGACCCATTTGATTCTATCACACCATAAGTTAAGTGGGTCTTTATCACCTGACCTTGGGAAGTTAGATCGTCTGAAAGTTCTTGCTCTTCATAACAACAACCTTTATGGGATAATTCCACCAGAATTGGGAAATTGCACGGAATTGCAGGGAATCTTTTTACAGGGTAATTACCTTAGTGGAATAATTCCAAGTGAAATAGGAAATCTCTCGCAGCTTCAAAATTTGGATATATCAAGCAATTCCCTTGGAGGGAGTATTCCAGTATCAATTGGAAAGTTGTATAATCTAAAAAAGTTCAATGTATCGACCAATTTTCTGGTCGGACCAATACCTTCTGATGGTGTCCTTGCCCACTTTACAGAAAGCTCGTTTGTTGGAAACCGAGGTTTGTGTGGAGTACAAATTGATTCAACATGTAAAGATGGTTCGCCTGGGGAAAAACCTTCAGACCAAAATCAAAATGAAAAGAAGAAATATTCTGGCCGACTTCTCATCAGTGCATTAGCAACTGTGGGCGCACTACTTTTGGTGGCACTTATGTGTTTCTGGGGTTGTTTTCTTTATAAAAAGTTCGGTAAAAACGATAGAGTTAGTCTTGCAGTGGACGTTGGTCCAGGTGCATCAATAGTGATGTTTCATGGAGACCTACCATATTCTTCGAAAGACGTTATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATAGGAGTAGGGGGATTTGGAACTGTTTACAAGCTTGCAATGGATGATGGGAATGTATTTGCATTGAAAAGGATTGTAAAGATGAATGAGGGCTTTGATCGATTTTTTGAGAGGGAGCTTGCAATTCTTGGTAGCATCAAACACCGTTATTTAGTGAACTTACGTGGATATTGCAACTCACCTACCTCAAAGTTGTTAATATATGACTACCTACCTGGTGGTAGTCTAGATGAAGTTCTTCATGAAAGATCTGAGCAACTAGACTGGGACTCACGGTTGAATATAATAATGGGAGCTGCAAAAGGGCTCGCATACTTGCACCATGATTGTTCACCTAGGATCATACACCGAGATATAAAATCAAGCAACATTTTACTCGATGGAAAATTGGATGCTCGGGTTTCTGATTTTGGACTTGCCAAACTTCTGGAAGATGAAGAATCTCACATCACTACTATTGTTGCTGGAACATTCGGTTATCTAGCTCCAGAGTATATGCAAAGTGGCAGAGCAACTGAGAAGACGGATGTTTATAGTTTCGGGGTGTTGACACTTGAAGTGCTTAGTGGAAAGCGGCCAACGGATGCATCTTTCATTGAAAAGGGTCTCAATATTGTTGGTTGGTTGAATTTCCTTATTACCGAAAATAGGCCGAGGGAAATTGTGGATCTACTATGTGAGGGGGTGCAGGTGGAGAGCCTTGATGCTTTGCTCTCTGTGGCTATTCAGTGTGTTTCCTCAAGTCCAGAGGATCGACCCACTATGCATCGAGTGGTCCAGTTGCTTGAATCGGAGGTCGTAACTCCTTGCCCAAGTGACTTCTATGACTCAGAGTAG 1773 0.414 MGICLIKGQWLWLLYVLLMHIVIVINNIEAISPDGEALVSFRTTIISSDGILVQWRPEDPDPCKWKGVKCDLKTKRVTHLILSHHKLSGSLSPDLGKLDRLKVLALHNNNLYGIIPPELGNCTELQGIFLQGNYLSGIIPSEIGNLSQLQNLDISSNSLGGSIPVSIGKLYNLKKFNVSTNFLVGPIPSDGVLAHFTESSFVGNRGLCGVQIDSTCKDGSPGEKPSDQNQNEKKKYSGRLLISALATVGALLLVALMCFWGCFLYKKFGKNDRVSLAVDVGPGASIVMFHGDLPYSSKDVIKKLETLNEEHIIGVGGFGTVYKLAMDDGNVFALKRIVKMNEGFDRFFERELAILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEVLHERSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGKLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLTLEVLSGKRPTDASFIEKGLNIVGWLNFLITENRPREIVDLLCEGVQVESLDALLSVAIQCVSSSPEDRPTMHRVVQLLESEVVTPCPSDFYDSE 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02589 590 SMART serkin_6 307 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02589 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Vivi2g02589 590 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 31 193 - -
Vivi2g02589 590 Gene3D Phosphorylase Kinase; domain 1 282 382 - -
Vivi2g02589 590 ProSitePatterns Protein kinases ATP-binding region signature. 313 339 IPR017441 GO:0005524
Vivi2g02589 590 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Vivi2g02589 590 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 75 575 - -
Vivi2g02589 590 SUPERFAMILY L domain-like 33 197 - -
Vivi2g02589 590 Gene3D Transferase(Phosphotransferase) domain 1 383 580 - -
Vivi2g02589 590 ProSiteProfiles Protein kinase domain profile. 307 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02589 590 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 383 585 - -
Vivi2g02589 590 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 281 382 - -
Vivi2g02589 590 Gene3D Ribonuclease Inhibitor 32 218 IPR032675 -
Vivi2g02589 590 Pfam Protein kinase domain 309 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02589 590 SUPERFAMILY Protein kinase-like (PK-like) 291 574 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02589 Vivi-Chr2 117259397 117273654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02589 1 583 Receptor kinase-like Gene Family AT2G35620 75.427 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Vivi2g02589 Pkinase 9.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02589 - - gmx:100819230 1050.81