Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02586 ATGTACGGTGGCGGAGGAGGAGACGACGCCCTGGCTGCTCGCCTCGGGTTAATCTCCCCGTCGCTGCTTATTCCGACGACGTCCATGATTTCCCGCGAGATGTCTCCGGCGCCTGTGAGGGAAGAGAGGCTTCCGTCTCAACCGCAGTGGAGTCAGCAGGAGACGAGAGAGTTCATAGCGATACGAGCGGAGTTGGAGAGGGACTTCACTGCTTCGAAGAGGAACAAGACGCTTTGGGAAGTGGTGAGTGCTAAGATGAAGGAGAGAGGATATATGAGGAGCCCTGAACAATGTAAATGCAAGTGGAAGAATCTTGTTAATCGCTATAAGGGAAAAGAGACATCTGATCCAGAGCATGGCAAGCAATGCCCATTTTTTGAAGAATTGCACGCAGTTTTTACTGAAAGGGCACATAACATGCAACGGTTACTTCTTGAATCTGAAAATCGTCCAGCTCAAGCAAAGAAAGGAGTGAAAAGAACAAGTGGATATCGATCCTCAGAGGAATTCTCAGAAGACGATGAGGAGGTTGAAGACGACAGTGAAGAGGAGAAACCAGCGAGAAGCAATACACGTAAAAGGAAAGCTAGCAAAATTGCAATGGAGAAGTCTTCAAGGGCAAACAATGCAAGCAGTAGTTCTGGTAATGTTCAGGAAATGCTCAAGGATTTTTTCCAGCAACAACTAAGGATGGAGATGCAGTGGAGGGAGATGATGGAAAGGCGTGCACATGAAAGACAATTGTTTGAACAAGAATGGCGACAGTCAATGGAAAAGCTTGAAAGGGAGAGATTAATGGTTGAACAGGAATGGAGGGAGAGAGAAGAACATAGGAGACTGAGGGAAGAGAGTAGGGCAGAGAGAAGGGATGCTCTGTTGACGACTCTTTTAAACAGGCTCACTCATGAATCTAACTAA 918 0.4706 MYGGGGGDDALAARLGLISPSLLIPTTSMISREMSPAPVREERLPSQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSAKMKERGYMRSPEQCKCKWKNLVNRYKGKETSDPEHGKQCPFFEELHAVFTERAHNMQRLLLESENRPAQAKKGVKRTSGYRSSEEFSEDDEEVEDDSEEEKPARSNTRKRKASKIAMEKSSRANNASSSSGNVQEMLKDFFQQQLRMEMQWREMMERRAHERQLFEQEWRQSMEKLERERLMVEQEWREREEHRRLREESRAERRDALLTTLLNRLTHESN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02586 305 Coils Coil 250 270 - -
Vivi2g02586 305 Gene3D - 50 111 - -
Vivi2g02586 305 MobiDBLite consensus disorder prediction 145 215 - -
Vivi2g02586 305 Pfam Myb/SANT-like DNA-binding domain 48 131 IPR044822 -
Vivi2g02586 305 CDD GT1 48 113 - -
Vivi2g02586 305 FunFam Zinc finger and SCAN domain-containing 20 50 111 - -
Vivi2g02586 305 MobiDBLite consensus disorder prediction 183 201 - -
Vivi2g02586 305 PANTHER FI21293P1 42 302 - -
Vivi2g02586 305 SMART sant 46 108 IPR001005 -
Vivi2g02586 305 ProSiteProfiles Myb-like domain profile. 50 106 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02586 Vivi-Chr2 117118025 117122151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02586 48 305 Trihelix Transcription Factor Family AT2G38250 45.420 3.52e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi2g02586 Myb_DNA-bind_4 2.9e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02586 - - gmx:100812635 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02586 2 117118025 117122151 Vivi2g02586 2 117118025 117122151 ECH