Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02572 ATGTGCAAACTGGTTCATCCTTACCCCCTCCACCACCACCTCTTCCAAGTTCTGCACGATCAGTCCCGCCACCCCCCTCCTCCTCCTCCTCCTCCTGCCCCAGGTCTTACACACATAGGTTTAACCCCTCCGCCACCACCACCTCCTCCTCCAATTCCAGGACGAACAAGTTCGGCCCTGCCACCTCCTCCTCCCCCTCCTCCTCCAGTTCCGGTACGAACAGGTGCAGTCCCACCACCTCCACCACCGCCTCCAAGCTCTACACGAACAGTATCATCCCCACCACCTCCACCACCACCTCCCCCAGGTCCTCCACGAGCAGGTTCAGCCCCACCGCCTCCCCCACCACCTCCCCCAGGTCCTCCACGAGCAGGTTCAGCCCCACCGCCTCCACCACCTCCTCCTCCAGGTCCTCCACGAGCAGGTTCAGCCCCACCGCCTCCACCACCTCCTCCAGGTCCTGCACGAACAGGATCAGCCCCACCGCCTCCACCACCTCCTCCACGAACAGGTTCAGCCCCACCGCCTCCACCACCTCCTCCAGGTCCTCCACGAACAGGTTCAGCACCACCGCCTCCACCACCTCCTCCAGGTCCTGCACGAACAGGTTCAGCACCACCGCCTCCACCACCTCCTCCAGGTCCTGCACGAACAGGTTCAGCCCCACCACCTCCACCACCTCCTCCAGGTCCTGCACGAACAGGTTCAGCCCCACCACCTCCACCACCTCCTCCAGGTCCTGCACGAACAGGTTCAGCCCCACCACCTCCACCACCACCTGGTCCTGCTAGAACAGGTTCAGCCCCACCACCTCCACCTCCACCTGGTCCTGCTAGAACAGGTTCAGGTCCGCCAGCACCAACGCCTCCCAATGCTCCTCCCCCACCGCCACCTGGTCGTGGTTCGTTGCTGGCACCTCCTGTTACTGCAGGCAAGGCCTCTAGTGTGCCTCCACCACCAAACAAATTAGCAACAAATGTGGGAAGAGGTCGTGGTACTGGTGCTATTGCTGTTAAGAAAACTTTGTTAAAGCCTCTACATTGGGTGAAAGTTTCTCGAGCAGCACAAGGGAGTCTATGGGCTGATTCACAGAAACAAGGCAGTGATTCAAGGGCCCCTGAAATAGACATATCAGAACTTGAGACCCTGTTTTCAGCAGCATCTATTTCTGATGGAAATAGTACTAAAGGTGGTCTCAGGCGTGGTTCTAATATTAACAAACCTGAGAAAATACAATTGATTGACCTGCGTAGAGCATATAATTGTGAAATAATGCTCTCTAAAGTCAAAATTCCTCTGCCAGATATGCTTAAAGCAATTTTGGCATTGGATTCTTGTGTTCTGGATATTGATCAGGTTGAGAACCTCATCAAGTTCTGTCCTACAAAGGAAGAGATGGAGGTGCTGAAGAATTATACCGGGAACAAGGATATGCTTGGAAAGTGTGAGCAGTTTTTTATGGAGCTGATGAAGGTTCCACGAGTAGAATCCAAGTTAAGGGTGTTTGCTTTTAAAATCACCTTTTCTGGTCAGGTGAGTGATTTAAGGAAAAATTTGAATACAATCAAAGATGCAACCAGAGAGGTCAAGGAATCTGTAAAACTGCGTCAAATAATGCAGACTATTCTTACGTTGGGCAATGCTTTGAATCAGGGAACAGCTCGAGGTTCAGCAGTAGGATTCAAATTGGACAGTCTTCTCAAGTTATCGGATACCCGTGCAAGAAATAACAAAATGACTTTAATGCATTATCTGTGTAAGCTTCTTGCTGAGAAAATGCCAGAACTGATAGATTTTGACAAGGATCTTGTCCATTTGGAAGCTGCTTCCAAGATCCAACTAAAAGCATTAGCTGAAGAAATGCAAGCTGTGCATAAAGGTTTAGAAAAAGTTGAGCAAGAACTCACTGCTTCTGAAAATGATGGCTCTATATCTTCAGGATTTCGCAAGGTGTTGAAGAGTTTTCTTGATTTTGCCGAAGCTGATGTGAGGTCACTTATATCATTGTATGCCGATGTGGGAAGAAGTGCCGATTCTTTGTCCCAATACTTTGGGGAGGATCCAGCTCGGTGCCCCTTTGAACAAGTGACACAAATACTTATTGTCTTTGTAAAGACCTTCAACAAGTCCAAGGACGAGAATGAAAGGCTTGCAGATGCCGAGAAAAAGAAATTAGAAAAAGAAGCCATGAAGGAAAAGGCAGCAAATAACATGCATTCTAGAAAAGATGTTGTTCGATAG 2241 0.5029 MCKLVHPYPLHHHLFQVLHDQSRHPPPPPPPPAPGLTHIGLTPPPPPPPPPIPGRTSSALPPPPPPPPPVPVRTGAVPPPPPPPPSSTRTVSSPPPPPPPPPGPPRAGSAPPPPPPPPPGPPRAGSAPPPPPPPPPGPPRAGSAPPPPPPPPGPARTGSAPPPPPPPPRTGSAPPPPPPPPGPPRTGSAPPPPPPPPGPARTGSAPPPPPPPPGPARTGSAPPPPPPPPGPARTGSAPPPPPPPPGPARTGSAPPPPPPPGPARTGSAPPPPPPPGPARTGSGPPAPTPPNAPPPPPPGRGSLLAPPVTAGKASSVPPPPNKLATNVGRGRGTGAIAVKKTLLKPLHWVKVSRAAQGSLWADSQKQGSDSRAPEIDISELETLFSAASISDGNSTKGGLRRGSNINKPEKIQLIDLRRAYNCEIMLSKVKIPLPDMLKAILALDSCVLDIDQVENLIKFCPTKEEMEVLKNYTGNKDMLGKCEQFFMELMKVPRVESKLRVFAFKITFSGQVSDLRKNLNTIKDATREVKESVKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELIDFDKDLVHLEAASKIQLKALAEEMQAVHKGLEKVEQELTASENDGSISSGFRKVLKSFLDFAEADVRSLISLYADVGRSADSLSQYFGEDPARCPFEQVTQILIVFVKTFNKSKDENERLADAEKKKLEKEAMKEKAANNMHSRKDVVR 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02572 746 Pfam Formin Homology 2 Domain 339 707 IPR015425 -
Vivi2g02572 746 Coils Coil 708 742 - -
Vivi2g02572 746 SMART it6_source 23 742 IPR015425 -
Vivi2g02572 746 MobiDBLite consensus disorder prediction 19 329 - -
Vivi2g02572 746 PRINTS Proline rich extensin signature 27 48 - -
Vivi2g02572 746 PRINTS Proline rich extensin signature 80 105 - -
Vivi2g02572 746 PRINTS Proline rich extensin signature 51 67 - -
Vivi2g02572 746 PANTHER FORMIN-J 61 737 - -
Vivi2g02572 746 SUPERFAMILY Formin homology 2 domain (FH2 domain) 408 737 - -
Vivi2g02572 746 Gene3D Formin, FH2 domain 335 718 IPR042201 -
Vivi2g02572 746 FunFam Formin-like protein 333 719 - -
Vivi2g02572 746 Coils Coil 614 634 - -
Vivi2g02572 746 ProSiteProfiles Formin homology-2 (FH2) domain profile. 333 733 IPR015425 -
Vivi2g02572 746 MobiDBLite consensus disorder prediction 714 746 - -
Vivi2g02572 746 MobiDBLite consensus disorder prediction 22 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02572 Vivi-Chr2 116778218 116783760 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02572 327 716 FH2 protein (formin) Gene Family AT1G31810 77.296 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02572 - - gmx:100781274 730.324