Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02570 ATGTCTCTTCTCAGTCGATTCTTCTACAAAAGACCTCCAGATGGTTTACTCGAATTCATCCCAAGAGTTTACGTCTTCGATTCTTGTTTCTCCACTGAAGCATTGTCAGATGGAATGTACGAGCTCTACCTTCACGAAATCGTGACTGAATTACATGAAGAGTTTCCAGAATCTTCGTTTTTAGCGTTTAATTTTCGTGATGGTGAGAAGCGTAGCAAATTCGCTGAGTTAATGTGTGAATACGATGTTATTGTTATGGATTATCCCAAAAATCACGAGGGTTGTCCTCTTTTGCCGCTTTCACTTGTTCAGCATTTTCTTCGTGTTTGTGAGAGTTGGCTTTCACTTGGGAACCATCAGAATGTGATTTTGTTTCATTGTGAGAGAGGGGGTTGGCCGCTTTTGGCTTTTTTGTTGGCGAGTTTGTTGATTTTTAGAAGGGTTCATAGTGGTGAGAGGAAGACACTTGAAATGGTTCATAGAGAAGCGCCTAAGGGTTTGTTGCAGTTGTTGTCTGCTTTGAATCCGTTGCCTTCGCAGCTTCGGTATATTCAATATGTTGCAAGGAGGAATATTGCGCCTGAGTGGCCTCCGCCGGAGAGGGCTTTGTCTTTGGATTGTGTTATTCTTAGGGGGATTCCTAGTTTTGATTCGTCGAATGGATGTAGGCCGATGTTTAGGATTTTTGGGAGGAATTTGTATAGTAAAGGTGGACCTTCTACTCAGATGATTTATAACATGCATAAAAAGAAGCACTTGAGGCATTATCGTCAGGTAGACTGTGATGTGATTAAGATTGATATTCAATGTTTAGTGCAAGGAGATGTGGTTTTGGAGTGTGTCCATTTGGATTTGGATCCGGAAAGGGAAGTGATGATGTTCCGTGTGATGTTTAGTACAGCGTTTATTCGATCCAATATATTGATGCTGACCGCTGAAAATTTGGACATTCTTTGGGATGCTAAGGAGCGGTATCCGAAAGGCTTCCGGGCTGAGGTTTTATTTGGGGAGGTTGAAAACTCAAGTTGTCAGAGAGCTTCGATGGAAACAACCATTTTGAATGGTGAGGAGAGAGGTGGATTACCCATTGAAGCATTTTCAAGAGTTCAAGAACTTTTTAGTGGAGTGGATTGGGGTGACAATGGTGATGCTGCAGCAGTGTGGCTGCTTAGACAGCTTAATGTCTTAAATGATGCCAAAGAGTTTTCGAGGTTGCAAGGTAAAGGAAGTTGGTTTTCATCGCCAGCTGACTCTGAAGAAGAATTTAATGAATCAAGTGTTGCTGATAGTTCAGATGAGGCATTTGATGTTACTCCCAAGTCTTCCGCCGATTCTTCAAAATTATGGACATCTGACATCCCTGATTTCGATCATTTAGCCTTAGAAAATAATGGTGGAAATTTTGTAAATCCCCCTTCAAGAATGTCTGATCATTTATTGACTAATAATGGTTCATCACCTCGTCACATTTCTGGTCCTCCTCTTAGTTGGAACACTGATAATGCTGCTGGTCCGCCTCCACCCCTTCCCCCTTCCATGGCCAGCAATGCTAGCTGTGCGTCCACATTGTCTTCACTTCCTCCTCCAGGACCAGAACATACAAGTTCAGTCCCACTACCTCCACCCCCACCACCACCTCCTCTAGGATTTGCTCAAACAGGTTCATCCCCCACCCCTCCACCTCTAGGTCTCGTACGGACAGGTTCATCTCCCCCACCCCCACCCCCGCCTCCTCCAGGTCCTGTACAAACAAGTTCAATCCCACCACCCCCGCCCCCTCCAGGTTCTGTACAAACACATTCAATCCCACCACCCCCGCCCCCTCCAGGTCATGTGCAAACTGGTTCATCCTTACCCCCTCCACCACCACCTCTTCCAAGTTCTGCACGATCAGTCCCGCCACCCCCCTCCTCCTCCTCCTCCTCCTGCCCCAGGTCTTACACACATAGGTTTAACCCCTCCGCCACCACCACCTCCTCCTCCAATTCCAGGACGAACAAGTTCGGCCCTGCCACCTCCTCCTCCCCCTCCTCCTCCAGTTCCGGTACGAACAGGTGCAGTCCCACCACCTCCACCACCGCCTCCAAGCTCTACACGAACAGTATCATCCCCACCACCTCCACCACCACCTCCCCCAGGTCCTCCACGAGCAGGTTCAGCCCCACCGCCTCCCCCACCACCTCCCCCAGGTCCTCCACGAGCAGGTTCAGCCCCACCGCCTCCACCACCTCCTCCTCCAGGTCCTCCACGAGCAGGTTCAGCCCCACCGCCTCCACCACCTCCTCCAGGTCCTGCACGAACAGGATCAGCCCCACCGCCTCCACCACCTCCTCCACGAACAGGTTCAGCCCCACCGCCTCCACCACCTCCTCCAGGTCCTCCACGAACAGGTTCAGCACCACCGCCTCCACCACCTCCTCCAGGTCCTGCACGAACAGGTTCAGCACCACCGCCTCCACCACCTCCTCCAGGTCCTGCACGAACAGGTTCAGCCCCACCACCTCCACCACCTCCTCCAGGTCCTGCACGAACAGGTTCAGCCCCACCACCTCCACCACCTCCTCCAGGTCCTGCACGAACAGGTTCAGCCCCACCACCTCCACCACCACCTGGTCCTGCTAG 2622 0.5065 MSLLSRFFYKRPPDGLLEFIPRVYVFDSCFSTEALSDGMYELYLHEIVTELHEEFPESSFLAFNFRDGEKRSKFAELMCEYDVIVMDYPKNHEGCPLLPLSLVQHFLRVCESWLSLGNHQNVILFHCERGGWPLLAFLLASLLIFRRVHSGERKTLEMVHREAPKGLLQLLSALNPLPSQLRYIQYVARRNIAPEWPPPERALSLDCVILRGIPSFDSSNGCRPMFRIFGRNLYSKGGPSTQMIYNMHKKKHLRHYRQVDCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFSTAFIRSNILMLTAENLDILWDAKERYPKGFRAEVLFGEVENSSCQRASMETTILNGEERGGLPIEAFSRVQELFSGVDWGDNGDAAAVWLLRQLNVLNDAKEFSRLQGKGSWFSSPADSEEEFNESSVADSSDEAFDVTPKSSADSSKLWTSDIPDFDHLALENNGGNFVNPPSRMSDHLLTNNGSSPRHISGPPLSWNTDNAAGPPPPLPPSMASNASCASTLSSLPPPGPEHTSSVPLPPPPPPPPLGFAQTGSSPTPPPLGLVRTGSSPPPPPPPPPGPVQTSSIPPPPPPPGSVQTHSIPPPPPPPGHVQTGSSLPPPPPPLPSSARSVPPPPSSSSSSCPRSYTHRFNPSATTTSSSNSRTNKFGPATSSSPSSSSSGTNRCSPTTSTTASKLYTNSIIPTTSTTTSPRSSTSRFSPTASPTTSPRSSTSRFSPTASTTSSSRSSTSRFSPTASTTSSRSCTNRISPTASTTSSTNRFSPTASTTSSRSSTNRFSTTASTTSSRSCTNRFSTTASTTSSRSCTNRFSPTTSTTSSRSCTNRFSPTTSTTSSRSCTNRFSPTTSTTTWSC 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02570 873 MobiDBLite consensus disorder prediction 467 498 - -
Vivi2g02570 873 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Vivi2g02570 873 MobiDBLite consensus disorder prediction 531 554 - -
Vivi2g02570 873 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Vivi2g02570 873 MobiDBLite consensus disorder prediction 564 640 - -
Vivi2g02570 873 MobiDBLite consensus disorder prediction 428 449 - -
Vivi2g02570 873 MobiDBLite consensus disorder prediction 641 873 - -
Vivi2g02570 873 MobiDBLite consensus disorder prediction 514 530 - -
Vivi2g02570 873 PANTHER FORMIN-J 1 639 - -
Vivi2g02570 873 MobiDBLite consensus disorder prediction 409 449 - -
Vivi2g02570 873 SMART PTEN_C2_2 198 337 IPR014020 -
Vivi2g02570 873 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 338 IPR035892 -
Vivi2g02570 873 ProSiteProfiles C2 tensin-type domain profile. 200 338 IPR014020 -
Vivi2g02570 873 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 187 IPR029021 -
Vivi2g02570 873 Gene3D - 197 341 - -
Vivi2g02570 873 MobiDBLite consensus disorder prediction 467 873 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02570 Vivi-Chr2 116776104 116779298 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02570 1 440 FH2 protein (formin) Gene Family AT1G31810 75.510 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02570 - - vvo:131651858 1377.07