Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02567 ATGGGATATGATTCTGATAGCCCCTCACGAGATGAAGATGACGAAGAAGAATATGAAGAGTCTGGCAAGGGTAACGGTTTATTTGGGTTCATGTTTGGAAATGTTGATAACTCTGGTGATCTCGATGCTGATTATCTTGATGAGGATGCAAAGGAGCATCTCTCTGCATTGGCTGACAAGCTGGGACCATCACTGACAGATATAGATTTGTCAGGAAAGTCACCACATACACCACATGGCATTGTTGAACAAGACTGTGGTGAAAAGGCTGACAATGCTGTTGATTACGAAGATATTGATGAAGAATATGATGGTCCGGAGACTGAAACTGCAAATGAAGAGGACTATTTATTGCCAAAAAAGGAATTTTTCGCTGCCGAAGCCTCTCTTGAAGCTTTGGAGCGCAAAACTTCCGTCTTCGATGATGAAAATTATGATGAAGAATCTGAAAAGGAACAAGACTTAGAGAGTAATGATGCTAAAGTTGATAACATCTCCTTAGCTGAGCAGGAGGAGAGCTTTGTAGATGCATCTAAAGGAGGGAGTGCTCTTGAGCATGATTTATATGATGGGTCGCCGCAAACTGAAGAACTGGATACTGATGTACAAATATCTGAGGAAGGACCTGAAGCTATAAAAAGATCTGTGGCTACACCGTTGCCTGTATTGTACGTGGACGATGGAAAAGTAGTTTTACGTTTCTCTGAAATCTTCGGTATTCAGGAACCTCCTCGAAAGGGAGAAAAGAAGGAGCGTCGGCATTCCACTCCTAGAGATAGATACAAGTCTTTGGATTTATCTGATGATATTGTAGAAGAGGATGAAGAGGAGTTCCTTAAAGGCTTCTCTCAGAGTCTCACACTTAGTAAACAGGTTTGTGTAGTCGATACTGATGTATCAGAAAACAATAATGTTGACTTGGAATTTCCAAAATTTGGATTTCTTCATGGAGATGCCTCACTTACTGCAAAAGATGATCGGCAACCAAAGGACTCTTGTCTTAGTGGTGAACCAATGAAAGGGGATTTTGCAGATGAACTTTCTTGGAAAGATCATCCCCTCATGTTGGCCAACTTCTATCCTCTTGATCAGCGAGACTGGGAAGATGAAATCCTTTGGGGCAACTCTCCTGTTGCAAGTGATAATGATAATAATATTGATAGCTATGAAATTTCTGGACCTGAATTGAGAGCTTTTGGTGATGCCGAAATAGAAATTGAAAGTGGGATACAAAATCTTCAGTCAGATCCCCATAAGATACTGGAGAAGAAAAATCATAATGTATTCATGTGCTGCTCTCCTGTTTCATTGGACCCGTTTGATTCAAGGGATTCTAATGGGGCTAAAACCAATTCAATATCCGAAAGTCCATTTCATCCCCAACTTCTGAGGCTAGAAGTAGACAGTTCTCATCTTGCAGATGAAAGAGGGGCAGATATATCTGAGAATCATAATCAAAGTGGTCAAGTAAAACGTTTGACCAAGGTTATGTCACAAAACAGAGACCTCATGGATGACTCATGGATAAACAAGATAATGTGGGAAGAGCTTGACAGGCCTAAGATGAAACCCAAGCTTATATTTGATCTTCAGGATAATCAGATGCACTTCGAAGTTTTGGATAGCAAGGATGGTACCCATCTTCGCCTTCATGCAGGGGCTATGATTTTAGCCCGCTCTTTGAATTCAACTAACGTGGACTCTTCTGAGCTACCGGGACATGGAGGTCAATATGGATGGAGATACGTTGCTAATGACAAACACTATTCAAATCGGAAAACTTCTCAGCAACTGAAATCAAACTCAAAAAAACGCTCAGCTCACGGTGTCAAAATTTTTCACTCGCAACCTGCACTGAAACTGCAGACCATGAAATTGAAGTTGAGCAATAAAGATATTGCAAATTTTCACCGGCCTAGAGCACTGTGGTATCCCCATGATAATGAGGTGGCTGTTAAAGAACAAGGAAAATTACCAACAAAAGGACCCATGAAAATTATTATGAAAAGCTTGGGTGGCAAAGGGTGTAAACTGCATGTCAATGCTGAAGAAACTATCTCTTCTGTTAAAGTAAAAGCTTCCAAAAAGCTAGATTTCAAGGCATCAGAAGCAGTGAAAATATTTTATTTGGGTAGGGAGCTTGAAGATCCCATATCACTTGTTGCACAAAATGTTCAGCCAAACTCCTTGTTACATCTTGTCCGTACAAAGATACATTTATGGCCTAGGGCACAAAGAGTTCCTGGTGAGGACAAGTCGTTGCGTCCTCCGGGAGCATTCAAGAAAAAATCTGATCTGTCTGTAAAAGATGGACATGTGTTTCTTATGGAGTATTGTGAAGAAAGGCCTTTACTTCTCGGCAATGTTGGAATGGGTGCAAGACTTTGCACATATTATCAAAAAAGTTCTCCGGAAGACCAATCTGGGTCCTTATTACGCAACACAGATAGTAGCTTGGGGCATGTTATTTCCCTGGACCCTGCAGACAAATCTCCTTTTCTTGGTGATTTAAAACCTGGTAGCAGTCAGTCATCACTCGAGACCAATATGTATAGAGCACCCATATTTACTCATAAAGTTCCTCCAACTGACTACCTGCTGGTTCGTTCGTCAAAGGGAAAGCTATCATTAAGGCGCATTGATAAAGTTAATGTTGTTGGACAGCAGGAGCCTCTCATGGAGGTGTTCTCGCCTGGAAGTAAGAATCTTCAGACTTTCATGATGAACAGGCTATTGGTACACATGTGCCGTGAGTTCCAAGCTGCAGAGAAGCAGCACTTGTCTCCATACATTCGCATTGACTACTTTCTTTCACAGTTTCCCTTCCTATCAGAAGCCTCATTTCGTAAAAGGATCAAGGAATATGCTAATTTACAGAGAGGCCCAAATGGACAATCCATTTTTGTTAAAAAGCGTAATTTCCGCATGTGGTCGGAGGATGAATTGAGAAAAATGGTGACACCAGAACTTGTTTGTGCTTTTGAAAGCATGCAAGCTGGCCTCTACCGCTTAAAACATTTAGGAATAACTGAAACACATCCTAATAATATTTCATCTGCAATGAGTCGGCTTCCTGATGAAGCAATAGCACTGGCTGCTGCATCACACATTGAGAGAGAACTGCAAATTACTCCATGGAACTTGAGTAGCAATTTTGTTGCCTGTACAACTCAGGGTAAGGAAAATATTGAACGGATGGAAATTACTGGAGTTGGTGATCCATCAGGCCGCGGCTTGGGTTTTAGCTATGCTAGGGCACCTCCAAAGGCACCAGTGTCTAGTGCAGTGGTGAAGAAAAAAGCAGCGGCTGGCAGGGGAGGTTCCACTGTTACCGGTACGGATGCTGATTTACGTAGATTAAGCATGGAGGCTGCACGAGAGGTACTTCTTAAATTCAATGTTCCCGAGGAAGTCATTGCAAAACAAACCAGATGGCATCGCATTGCTATGATACGCAAACTTTCAAGTGAGCAGGCTGCGTCTGGGGTTAAGGTTGATCCAACAACCATAGGAAAATATGCCCGTGGTCAGCGAATGTCCTTTCTTCAGTTACAGCAGCAGACCAGAGAGAAGTGCCAGGAGATTTGGGATAGGCAAGTTCAGAGTTTGTCAGCTTTAAATGGTGATGATAATGAGAGTGATTCAGAAGGAAATAGTGATCTAGATTCTTTTGCTGGGGATCTGGAAAATTTGCTTGATGCTGAGGAATTTGAAGAGGGAGAAGAAGGTACTAATGACCTAAAACGTGATAAGGGAGACAGTGTTAAGGGTCTTAAAATGAGAAGACGCACAACCTTGGCTCAGGCAGAGGAGGAAATAGAAGATGAAGCAGCTGAGGCCACTGAATTATGCAGGCTGCTTATGGATGATGATGGAGCTTACCGGAAGAAAAAGAAGAATGCCAGGGTTATGGTGGATGCAAGAAGATTGATACCGAAACTACAACCAAAATTTGTCTTTGACAGCACTGAACAAGTAAAGCTAACAAATACAACATTGCAACTTGATGGAACTAATCATTTTAAGGAGGATGCAATTACAGATCATAGGGAGGATGATAAATTTTCTGCTAAGAAAAGCAAATCAGTTAAGGTCAATAAAGCAAAGAAGAGTGACATTTCACCTATTAGTGTATCAAATAAAAAAATCAAACTAAATATGGGAGAAGGAATCAAGAACCAGGTATTTAAGGAGAAAAAACCATCAAGGGAAACTTTTGTTTGTGGAGCATGTGGCCAGCTTGGGCACATGCGAACGAACAAGAATTGTCCGAAATATGGTGAAGATCTAGAAGCACAACTTGAACCTACGGACATGGAAAAATTAACTGGACGATCCAGCTTTGTTGATTCTTCTAGCCAGTCTCAGCATAAACTCTCCTCCAAAAAGTCAATATCAAAGATCGTAACAAAAATTGCTCCAGTTGAGAATTCATCAAAAATTCCGTTGAAGTTCAAATGCAGTTCGACAGAGAAATCTTCTGATAGACATGCAATAGAAACCCTGCAGAGTATTGACAAGCCAGTCACTTCTGACTCAGAAACTGCTAAGTCTGCTAAGATTAGTAAGATAATTATTCCAAACAAAGTGAAATCAGAGGATACACAGGCTGAATCTCTTAAGCATGCTATTGTTATACGTCCTCCTACTGATCCTGGTAGAGGTCAGGTTGATTCTCATAAGTTCCCAATTAAAATCCGCCCGCCTGCAGAAATAGATAGGGAGCAAAGTCACAAAAAGATTGTTATAAAACGAACAAAGGATGTTGCTGATCTGGAACTTGACAGTCCTGGTGGAAACACAGGACTTGAACACAGAAAAACTAAAAGAATTGTGGAATTAGCGAATTTTGAGAAGCACAGAAAGCAGGAGACAATGTATTCAACTGAAAGTATGGTAAAATGGAATGCTAAAGAGGATAGAAGATGGTGGGAAGAGCAAGAGAAACGAAGAAATGAAGTGAGACTTAGAGAAAACAATGCAAAGAGGTATGGCACAGAAGAAAGGAGGATACGCAAGGAACGAGAAAGGTTAGATGAGTTAAAAAGATATGAACAAGAAAGGTTAGATGAGTTAAAAAGATATGAAGAAGATATTAGAAGAGAGAGGGAAGAGGAAGAACGACAAAAAGCTAAGAAGAAAAAGAAAAAGAGAAAGACCGATTTAAGAGATGAGTATTTAGATGATCCCAGGGAAAGAAGATATGGTAAGAGGATGCTAGAAAGAGAACGGAGTGGAAAACGGAGATCAGTTGTTGAGACAGGAAAGATTAGTGGAGATTTTATGCCGCCAACTAAACGCCGAAGAGGGGGAGGAGGAGAGGTTGGTTTGGCAAATATCTTGGAGAGTATTGTGGATGCCATTGTGAAAGATAGGCACGATCTGTCTTATCTTTTTGTAAAACCAGTTCCCAAGAAAGAAGCCCCTGACTACCTGGATATCATAGAGACGCCTATGGATCTTTCCAAAATCAGGCAACGGGTACGTAATATGGAGTACAAAAGTCGTGAAGACTTCAGACATGATGTATGGCAAATTACTTTTAATGCCCATAAATATAATGATGGACGAAATCCTGGAATCCCTCCAGTTGCAGATATGCTTTTGGAATATTGTGATTATTTGTTGAATGAGAATGATGATAATCTTACTGCTGCTGAAGCTGGTATTGAAATTAAAGATTTCTAA 5688 0.4084 MGYDSDSPSRDEDDEEEYEESGKGNGLFGFMFGNVDNSGDLDADYLDEDAKEHLSALADKLGPSLTDIDLSGKSPHTPHGIVEQDCGEKADNAVDYEDIDEEYDGPETETANEEDYLLPKKEFFAAEASLEALERKTSVFDDENYDEESEKEQDLESNDAKVDNISLAEQEESFVDASKGGSALEHDLYDGSPQTEELDTDVQISEEGPEAIKRSVATPLPVLYVDDGKVVLRFSEIFGIQEPPRKGEKKERRHSTPRDRYKSLDLSDDIVEEDEEEFLKGFSQSLTLSKQVCVVDTDVSENNNVDLEFPKFGFLHGDASLTAKDDRQPKDSCLSGEPMKGDFADELSWKDHPLMLANFYPLDQRDWEDEILWGNSPVASDNDNNIDSYEISGPELRAFGDAEIEIESGIQNLQSDPHKILEKKNHNVFMCCSPVSLDPFDSRDSNGAKTNSISESPFHPQLLRLEVDSSHLADERGADISENHNQSGQVKRLTKVMSQNRDLMDDSWINKIMWEELDRPKMKPKLIFDLQDNQMHFEVLDSKDGTHLRLHAGAMILARSLNSTNVDSSELPGHGGQYGWRYVANDKHYSNRKTSQQLKSNSKKRSAHGVKIFHSQPALKLQTMKLKLSNKDIANFHRPRALWYPHDNEVAVKEQGKLPTKGPMKIIMKSLGGKGCKLHVNAEETISSVKVKASKKLDFKASEAVKIFYLGRELEDPISLVAQNVQPNSLLHLVRTKIHLWPRAQRVPGEDKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLGNVGMGARLCTYYQKSSPEDQSGSLLRNTDSSLGHVISLDPADKSPFLGDLKPGSSQSSLETNMYRAPIFTHKVPPTDYLLVRSSKGKLSLRRIDKVNVVGQQEPLMEVFSPGSKNLQTFMMNRLLVHMCREFQAAEKQHLSPYIRIDYFLSQFPFLSEASFRKRIKEYANLQRGPNGQSIFVKKRNFRMWSEDELRKMVTPELVCAFESMQAGLYRLKHLGITETHPNNISSAMSRLPDEAIALAAASHIERELQITPWNLSSNFVACTTQGKENIERMEITGVGDPSGRGLGFSYARAPPKAPVSSAVVKKKAAAGRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTIGKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSALNGDDNESDSEGNSDLDSFAGDLENLLDAEEFEEGEEGTNDLKRDKGDSVKGLKMRRRTTLAQAEEEIEDEAAEATELCRLLMDDDGAYRKKKKNARVMVDARRLIPKLQPKFVFDSTEQVKLTNTTLQLDGTNHFKEDAITDHREDDKFSAKKSKSVKVNKAKKSDISPISVSNKKIKLNMGEGIKNQVFKEKKPSRETFVCGACGQLGHMRTNKNCPKYGEDLEAQLEPTDMEKLTGRSSFVDSSSQSQHKLSSKKSISKIVTKIAPVENSSKIPLKFKCSSTEKSSDRHAIETLQSIDKPVTSDSETAKSAKISKIIIPNKVKSEDTQAESLKHAIVIRPPTDPGRGQVDSHKFPIKIRPPAEIDREQSHKKIVIKRTKDVADLELDSPGGNTGLEHRKTKRIVELANFEKHRKQETMYSTESMVKWNAKEDRRWWEEQEKRRNEVRLRENNAKRYGTEERRIRKERERLDELKRYEQERLDELKRYEEDIRREREEEERQKAKKKKKKRKTDLRDEYLDDPRERRYGKRMLERERSGKRRSVVETGKISGDFMPPTKRRRGGGGEVGLANILESIVDAIVKDRHDLSYLFVKPVPKKEAPDYLDIIETPMDLSKIRQRVRNMEYKSREDFRHDVWQITFNAHKYNDGRNPGIPPVADMLLEYCDYLLNENDDNLTAAEAGIEIKDF 1895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02567 1895 Gene3D - 646 736 - -
Vivi2g02567 1895 SUPERFAMILY Bromodomain 1762 1882 IPR036427 GO:0005515
Vivi2g02567 1895 MobiDBLite consensus disorder prediction 1 29 - -
Vivi2g02567 1895 Gene3D - 19 65 IPR036741 -
Vivi2g02567 1895 Pfam Protein of unknown function (DUF3591) 584 1150 IPR022591 -
Vivi2g02567 1895 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 10 1891 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Vivi2g02567 1895 MobiDBLite consensus disorder prediction 137 195 - -
Vivi2g02567 1895 SMART bromo_6 1770 1881 IPR001487 GO:0005515
Vivi2g02567 1895 Pfam Zinc knuckle 1408 1427 IPR041670 -
Vivi2g02567 1895 MobiDBLite consensus disorder prediction 1700 1728 - -
Vivi2g02567 1895 CDD Bromodomain 1780 1876 - -
Vivi2g02567 1895 Coils Coil 1664 1723 - -
Vivi2g02567 1895 MobiDBLite consensus disorder prediction 68 89 - -
Vivi2g02567 1895 SUPERFAMILY Ubiquitin-like 634 734 IPR029071 -
Vivi2g02567 1895 MobiDBLite consensus disorder prediction 1504 1518 - -
Vivi2g02567 1895 ProSiteProfiles Ubiquitin domain profile. 664 734 IPR000626 GO:0005515
Vivi2g02567 1895 FunFam Transcription initiation factor TFIID subunit 1 646 736 - -
Vivi2g02567 1895 ProSiteProfiles Bromodomain profile. 1791 1861 IPR001487 GO:0005515
Vivi2g02567 1895 SMART ubq_7 664 736 IPR000626 GO:0005515
Vivi2g02567 1895 Coils Coil 1259 1290 - -
Vivi2g02567 1895 Pfam Ubiquitin family 668 736 IPR000626 GO:0005515
Vivi2g02567 1895 ProSitePatterns Bromodomain signature. 1796 1853 IPR018359 -
Vivi2g02567 1895 Pfam TATA box-binding protein binding 15 58 IPR009067 -
Vivi2g02567 1895 Pfam Bromodomain 1791 1857 IPR001487 GO:0005515
Vivi2g02567 1895 Gene3D - 1693 1894 IPR036427 GO:0005515
Vivi2g02567 1895 MobiDBLite consensus disorder prediction 1496 1518 - -
Vivi2g02567 1895 SUPERFAMILY TAF(II)230 TBP-binding fragment 21 59 IPR036741 -
Vivi2g02567 1895 MobiDBLite consensus disorder prediction 1242 1263 - -
Vivi2g02567 1895 PRINTS Bromodomain signature 1842 1861 IPR001487 GO:0005515
Vivi2g02567 1895 PRINTS Bromodomain signature 1824 1842 IPR001487 GO:0005515
Vivi2g02567 1895 PRINTS Bromodomain signature 1808 1824 IPR001487 GO:0005515
Vivi2g02567 1895 PRINTS Bromodomain signature 1794 1807 IPR001487 GO:0005515
Vivi2g02567 1895 MobiDBLite consensus disorder prediction 1237 1263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02567 Vivi-Chr2 116735965 116754591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02567 664 734 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 36.620 6.46e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02567 K03125 - gmx:100780733 2930.58