Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02538 ATGGAGAGGTACAAAATAATTAAGGAAGTTGGTGATGGAACATTTGGGAGTGTCTGGAGAGCTATTAGTAAGCAAGCTGGCGAAGTTGTTGCGATCAAGAAAATGAAAAAGAAATATTACTCTTGGGAAGAGTGTGTAAATCTCAGAGAAGTCAAGTCTTTACGAAAAATGAACCACCCAAATATTGTGAAACTGAAGGAAGTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTTGAGTACATGGAATGCAACCTATACCAACTTATGAAAGACAGGGAAAAATTGTTTTCTGAAAATGAAATTAGAAACTGGTGTTTTCAAGTTTTCCAAGGTCTGGCTTACATGCATCAGCGTGGTTATTTCCATCGCGACCTTAAACCTGAAAATTTGCTGGTTTCTAAGGATATCATCAAAATTGCTGATTTTGGTCTAGCCCGAGAGATCAATTCACAACCACCCTACACTGAGTATGTCTCCACAAGATGGTATCGTGCTCCTGAAGTGCTGCTTCAGTCTTATATCTATAACGCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAGCTGTTCTCTCTACGACCTCTTTTTCCAGGAGCCAGTGAGGCAGATGAGATCTACAAAATATGTGGTGTGATAGGCAGTCCAACCACTGAATCATGGGCAGATGGACTTAAACTTGCAAGAGATATTAATTATCAGTTTCCACAGCTTGCTGGCATAAACCTTTCTGCATTGATCCCATCTGCAAGTGATCATGCAATCAGCCTTATCCAATCACTTTGCTCCTGGGATCCATGCAAGAGGCCAACAGCTTCAGAGGCCCTTCAACATCCTTTCTTCCAGAGCTGCTTTTACATTCCTCCATCCCTTCGCTCCAGAGCTATAGCGAGAACCCCTCCACCTGGAATTAGGGGATCACTGGATCAGCAAGGGGTCAAGAGATATCCTGGTGCTCTACCCAACTCAAAGCTCACCAATTATTTTCCATCTCCAAAATTACAGCCTTCTTCAGGTGTGCAACGGAAGCTGGATATGGTAAATCAGGGTGACAAGAATGACATTAAGAATGATAAATCAATGAAGACTACTACACAATCGAAGTATCGACAACCAGGAAAGGACAATCAAACTTCTATAAACAAGGGAAGATCTACACGCAGTGTTTTAGAAACAGCTGAGAGGTTGGCCAATATGTCTATTGGCGCTCGAAGGCAGTCCATGGAGCAACCCCGTGCTCCTCCCATGAAGGCTGGAGTCAATTGGAGTTCTCCGATGAAGGCTGGAGTCAATTGGAGCTCTGAATCTCCCAACTTCATGCTCAGGCCTGCACCACAGATCTCAACTGGGAGAACGTACCCTAGAAAAGTTGCTGGATGA 1386 0.4329 MERYKIIKEVGDGTFGSVWRAISKQAGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKLFSENEIRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDIIKIADFGLAREINSQPPYTEYVSTRWYRAPEVLLQSYIYNAKVDMWAMGAIMAELFSLRPLFPGASEADEIYKICGVIGSPTTESWADGLKLARDINYQFPQLAGINLSALIPSASDHAISLIQSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRSRAIARTPPPGIRGSLDQQGVKRYPGALPNSKLTNYFPSPKLQPSSGVQRKLDMVNQGDKNDIKNDKSMKTTTQSKYRQPGKDNQTSINKGRSTRSVLETAERLANMSIGARRQSMEQPRAPPMKAGVNWSSPMKAGVNWSSESPNFMLRPAPQISTGRTYPRKVAG 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02538 461 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02538 461 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
Vivi2g02538 461 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Vivi2g02538 461 MobiDBLite consensus disorder prediction 366 390 - -
Vivi2g02538 461 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Vivi2g02538 461 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 356 - -
Vivi2g02538 461 Gene3D Transferase(Phosphotransferase) domain 1 84 288 - -
Vivi2g02538 461 FunFam cyclin-dependent kinase F-4-like 1 83 - -
Vivi2g02538 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Vivi2g02538 461 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02538 461 MobiDBLite consensus disorder prediction 300 390 - -
Vivi2g02538 461 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02538 461 MobiDBLite consensus disorder prediction 349 365 - -
Vivi2g02538 461 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Vivi2g02538 461 CDD STKc_MAK_like 4 283 - -
Vivi2g02538 461 MobiDBLite consensus disorder prediction 326 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02538 Vivi-Chr2 115987762 115993783 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02538 1 290 Core Cell Cycle Gene Families AT3G48750 37.248 6.34e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Vivi2g02538 Pkinase 6.9e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02538 K08829 - gmx:100810150 773.081