Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02535 ATGTTTGAATGCATAACATGTAATAGGAAGCAGACGGCGGAAGATACGGATGAGGAGGTTGGTCAGAGTGGCACGCCGACCACGAAGCAAGCCGTCAAAAGCCTGACTGCGCAGATAAAAGATATAGTACTCAAGTTTACTGGTGCTTCCTGCAAACGATCCGGCTCTTACAGAAAAGGACTGAGATCTTCTCCAAACTCTGTAGAGAGCACGGAAGGGGTTCGATATCCTTATATGGGAGGTGTAACCTCAGGTTCTACTCCTCCTTGGGAGTTAGGTGCCGGCTATAATAATGGCAACCTAACTCCTAGAGTGCAAGAGCAGGTTGTAGCAGCAGCTGAAGCAGTGGTGGAGGAAGAGATTGGAAACAAAATGTGGGTGGCACAAGTGGAGCCAGGGGTTGATGTTACCTTTGTGTCTCTTCCGGGTGGTGGAAATGATCTCAGAAGAATTCGATTCAACCGAGAAATGTTTGATAAATGGCAAGCTCAAGTATGGTGGGGAGAGAATTATGACAGAATCAGGGAGCTGTATAATGTCCAGAGATTTAATCGTCAAGCTCTCAACACTCCTCCGCCATCTGAGGATGAGCAAAGAGATTCTTCTGACCCAAGGCATCAACTAACTACAAGAGATAGCCCTGTGGCTGCATGGTTGAACAATGATTCAATGCTAAGGAATCAGAATTATAGTCCTTCAGGTTTTACTATGAGTCAAGAAAGCAGTAGCAACCAAATCATGCATGCAGCAGGGTCATCCATGGAAGCATCAAGAGCCTCTTCTAGAGATGAGCTGTTTTTCAGCAATGCGGTTGGAATTGAGTCAGAATGGATTGAGCAAGTTGAGCCCGGTGTGTTTGTTACTATCAGGCGGTTGCCTGATGGAAACAAGGAGCTTCGTCGTGTCAGATTCAGCCGACAAAGGTTTGGAGATGAAGATGCAAGGAAATGGTGGGAAGAGAACAGAGAAAGAGTTCAAGTTCAATACATGTGA 993 0.4602 MFECITCNRKQTAEDTDEEVGQSGTPTTKQAVKSLTAQIKDIVLKFTGASCKRSGSYRKGLRSSPNSVESTEGVRYPYMGGVTSGSTPPWELGAGYNNGNLTPRVQEQVVAAAEAVVEEEIGNKMWVAQVEPGVDVTFVSLPGGGNDLRRIRFNREMFDKWQAQVWWGENYDRIRELYNVQRFNRQALNTPPPSEDEQRDSSDPRHQLTTRDSPVAAWLNNDSMLRNQNYSPSGFTMSQESSSNQIMHAAGSSMEASRASSRDELFFSNAVGIESEWIEQVEPGVFVTIRRLPDGNKELRRVRFSRQRFGDEDARKWWEENRERVQVQYM 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02535 330 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 329 IPR044532 -
Vivi2g02535 330 ProSiteProfiles BRX domain profile. 275 330 IPR013591 -
Vivi2g02535 330 MobiDBLite consensus disorder prediction 185 212 - -
Vivi2g02535 330 Pfam Transcription factor regulating root and shoot growth via Pin3 124 178 IPR013591 -
Vivi2g02535 330 Pfam Transcription factor regulating root and shoot growth via Pin3 274 329 IPR013591 -
Vivi2g02535 330 ProSiteProfiles BRX domain profile. 124 179 IPR013591 -
Vivi2g02535 330 Pfam Transcription factor BRX N-terminal domain 25 51 IPR027988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02535 Vivi-Chr2 115978102 115982996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02535 1 330 Major Intrinsic Protein MIP AT1G31880 47.107 3.50e-100 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02535 - - mtr:11415593 396.741