Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02532 ATGGGAGTTGATAATGGTGATAATCCTCTATCTGACAAAGTTGTTATCCTCCTTATTGCCATGGGTTCAGCATTATTTGTTGTCTCATTGTACCATGTCATATCCATTTGTTTTTGCCGCCAACAACGAACCACCACAAACCAAAACTCACCACAACACAACCGCGACAACGAAAGCACATCGATGTCAGTAGCAAGCATCATTCCAACGCACAAGTACCTCAAGAGAAGTAAAGCTGGTGTTTCTGATGACGAAGGCGGCGACACGTGTGCAGTGTGTTTGGGAGATTTTGAGGAGGATGAGGAGTTGAGGACTATGCCTGAGTGTTTGCACTCCTTTCATGTAGAGTGTATTGACATGTGGCTCCATTCGCATTCGAGTTGCCCCATTTGTCGCGCCAGCGCCGCTCCTTCGCCGGCCGTGAATGAACAACATCGTAGCATAGATATTAGTCATAATACGGCTCCACTTGCTATCATGCAACATGGATTGGTGCGATGGTGA 504 0.4663 MGVDNGDNPLSDKVVILLIAMGSALFVVSLYHVISICFCRQQRTTTNQNSPQHNRDNESTSMSVASIIPTHKYLKRSKAGVSDDEGGDTCAVCLGDFEEDEELRTMPECLHSFHVECIDMWLHSHSSCPICRASAAPSPAVNEQHRSIDISHNTAPLAIMQHGLVRW 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02532 167 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 13 136 IPR044675 -
Vivi2g02532 167 CDD RING-H2_EL5-like 90 132 - -
Vivi2g02532 167 SUPERFAMILY RING/U-box 85 138 - -
Vivi2g02532 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 139 IPR013083 -
Vivi2g02532 167 ProSiteProfiles Zinc finger RING-type profile. 90 132 IPR001841 -
Vivi2g02532 167 SMART ring_2 90 131 IPR001841 -
Vivi2g02532 167 Pfam Ring finger domain 88 132 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02532 Vivi-Chr2 115897167 115897687 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02532 26 150 C3H Transcription Factor Family AT4G10150 33.571 1.09e-24 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02532 - - psat:127119859 295.049