Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02524 ATGGCTGTTCCAACTTCAACCACTCTCTTAAAAATGGAGAACATACCTAACAAAGGTAGAGGCCTTATTGCAGCACAAGATCTCAAAGCTGGCCAAATAATCCTCACTGAATCCCCTCTCCTTCTCTACTCAGCTTCACCTCTCTTCACTCCTTCACCCTCCCCTTACTGTCACCACTGCTTCAGAACCCTACAACCTTCACAAATATTTCCATGTCCTTCTTGCTCAAACTACAATTTCTGCGGCCAAAAGTGTCTCTCCATTGCACTTAACTCATCTCACTCATCATGGTCATGTCAAATACTCTCTCATCTTCAAAACCATACTTCACCTTTATCAGAAAAACCATATGAACTCCAAGTTCAAGCTCGTTTCATTGTTGCTGCTTACAATCTTGATATTCACACCCCATCAAATCTTCAAGCTTTACTCTCTCTTCATAGTATTCCTAATGATGATGAAAGTGATGCTATATTTGGTGCTGCTAAGTTCATTCATTCTCTTATCTCACCTTTTTGCCCACCCCACATGAATTTTTCACCCGAACTAGCTGCAAAACTCATTGCAAAAGAAAGATTAAACTCTTTTTGCTTAATGGAACCTTATTCACAAAAGGGTCCTCAAAGATCCATTAAGGCTTATGGAATTTACCAAAAAGCTACTCTTTTTAACCATGGTTGTATTCCTAATGCATGCAGGTTTGATTATGTGGAAAATGGTGAACCTGGTGATGAACATAACACTGATATTGTTATTAGGCTGATCAACGATGTTGATGTTGGAAGTGAGATCTGCATAAGCTACTTTAGAATTAATAAGGATTACTCAACGAGGAAAAGGATCTTGATGGAGGATTATGGTTTTGCTTGTGAATGTGATAGGTGTAAGATTGAAGCAAATTGGAATGATGGTGAGAACAACCACAGTGATCTGCCACATGTGAATTTTTTGTCTAAGTTTGTCTGTGATAAGGTGAATTGTGCAGGTACTTTGGCTCCTCTGCCTCCAAAAGATGGTGAAAAATCTAATGTTCTTGAGTGTAATTTCTGTGGTAATTTGAAAGTTGACACTACTACTTAA 1080 0.3861 MAVPTSTTLLKMENIPNKGRGLIAAQDLKAGQIILTESPLLLYSASPLFTPSPSPYCHHCFRTLQPSQIFPCPSCSNYNFCGQKCLSIALNSSHSSWSCQILSHLQNHTSPLSEKPYELQVQARFIVAAYNLDIHTPSNLQALLSLHSIPNDDESDAIFGAAKFIHSLISPFCPPHMNFSPELAAKLIAKERLNSFCLMEPYSQKGPQRSIKAYGIYQKATLFNHGCIPNACRFDYVENGEPGDEHNTDIVIRLINDVDVGSEICISYFRINKDYSTRKRILMEDYGFACECDRCKIEANWNDGENNHSDLPHVNFLSKFVCDKVNCAGTLAPLPPKDGEKSNVLECNFCGNLKVDTTT 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02524 359 Gene3D SET domain 21 296 IPR046341 -
Vivi2g02524 359 SUPERFAMILY SET domain 11 296 IPR046341 -
Vivi2g02524 359 Gene3D - 109 195 - -
Vivi2g02524 359 Pfam SET domain 19 268 IPR001214 GO:0005515
Vivi2g02524 359 Gene3D - 56 108 - -
Vivi2g02524 359 SMART set_7 8 275 IPR001214 GO:0005515
Vivi2g02524 359 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 305 357 IPR044238 -
Vivi2g02524 359 CDD SET_SMYD 193 295 - -
Vivi2g02524 359 ProSiteProfiles SET domain profile. 8 269 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02524 Vivi-Chr2 115715489 115716968 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi2g02524 SET 4.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02524 - - cam:101515628 543.117